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Found 9 Documents (Results 1–9)

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Mahbub, Sazan; Sawmya, Shashata; Saha, Arpita; Reaz, Rezwana; Rahman, M. Sohel; Bayzid, Md. Shamsuzzoha

QT-GILD: Quartet based gene tree imputation using deep learning improves phylogenomic analyses despite missing data. (English) Zbl 1496.92060

Pe’er, Itsik (ed.), Research in computational molecular biology. 26th annual international conference, RECOMB 2022, San Diego, CA, USA, May 22–25, 2022. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 13278, 159-176 (2022).
MSC:  92D15 92D20 92-08
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Willson, James; Roddur, Mrinmoy Saha; Warnow, Tandy

Comparing methods for species tree estimation with gene duplication and loss. (English) Zbl 1480.92158

Martín-Vide, Carlos (ed.) et al., Algorithms for computational biology. 8th international conference, AlCoB 2021, Missoula, MT, USA, June 7–11, 2021. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 12715, 106-117 (2021).
MSC:  92D15 92B10 92D10
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Yu, Xilin; Le, Thien; Christensen, Sarah; Molloy, Erin K.; Warnow, Tandy

Advancing divide-and-conquer phylogeny estimation using Robinson-Foulds supertrees. (English) Zbl 1518.92103

Kingsford, Carl (ed.) et al., 20th international workshop on algorithms in bioinformatics. WABI 2020, September 7–9, 2020, Pisa, Italy, virtual conference. Proceedings. Wadern: Schloss Dagstuhl – Leibniz Zentrum für Informatik. LIPIcs – Leibniz Int. Proc. Inform. 172, Article 15, 17 p. (2020).
MSC:  92D15 92-08
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Legried, Brandon; Molloy, Erin K.; Warnow, Tandy; Roch, Sébastien

Polynomial-time statistical estimation of species trees under gene duplication and loss. (English) Zbl 1500.92056

Schwartz, Russell (ed.), Research in computational molecular biology. 24th annual international conference, RECOMB 2020, Padua, Italy, May 10–13, 2020. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 12074, 120-135 (2020).
MSC:  92D10 92D15
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Christensen, Sarah; Molloy, Erin K.; Vachaspati, Pranjal; Warnow, Tandy

TRACTION: fast non-parametric improvement of estimated gene trees. (English) Zbl 1495.92044

Huber, Katharina T. (ed.) et al., 19th international workshop on algorithms in bioinformatics, WABI 2019, Niagara Falls, NY, USA, September 8–10, 2019. Proceedings. Wadern: Schloss Dagstuhl – Leibniz-Zentrum für Informatik. LIPIcs – Leibniz Int. Proc. Inform. 143, Article 4, 16 p. (2019).
MSC:  92D15 92D10 92-08
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