Found 55 Documents (Results 1–55)
Representing and extending ensembles of parsimonious evolutionary histories with a directed acyclic graph. (English) Zbl 1530.92149
Identifiability of local and global features of phylogenetic networks from average distances. (English) Zbl 1505.92143
The tree of blobs of a species network: identifiability under the coalescent. (English) Zbl 1505.92135
Classes of explicit phylogenetic networks and their biological and mathematical significance. (English) Zbl 1491.92088
A stochastic Farris transform for genetic data under the multispecies coalescent with applications to data requirements. (English) Zbl 1498.92130
Identifiability of species network topologies from genomic sequences using the logDet distance. (English) Zbl 1486.92128
Discrete coalescent trees. (English) Zbl 1475.92116
Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes. (English) Zbl 1471.92236
Complete characterization of incorrect orthology assignments in best match graphs. (English) Zbl 1460.92149
Computing nearest neighbour interchange distances between ranked phylogenetic trees. (English) Zbl 1511.92043
Caterpillars on three and four leaves are sufficient to binary normal networks. (English) Zbl 1451.92225
On the minimum value of the Colless index and the bifurcating trees that achieve it. (English) Zbl 1443.92126
Biodiversity, Shapley value and phylogenetic trees: some remarks. (English) Zbl 1435.92046
Reviewer: Andrey Zahariev (Plovdiv)
Distribution and asymptotic behavior of the phylogenetic transfer distance. (English) Zbl 1418.92082
Best match graphs. (English) Zbl 1415.92133
J. Math. Biol. 78, No. 7, 2015-2057 (2019); corrigendum ibid. 82, No. 6, Paper No. 47, 9 p. (2021).
Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem. (English) Zbl 1397.92465
Homogenization analysis of invasion dynamics in heterogeneous landscapes with differential bias and motility. (English) Zbl 1392.92119
Inferring phylogenetic trees from the knowledge of rare evolutionary events. (English) Zbl 1386.05186
The mathematics of xenology: di-cographs, symbolic ultrametrics, 2-structures and tree-representable systems of binary relations. (English) Zbl 1368.05023
On the challenge of reconstructing level-1 phylogenetic networks from triplets and clusters. (English) Zbl 1366.92087
Phase transition on the convergence rate of parameter estimation under an Ornstein-Uhlenbeck diffusion on a tree. (English) Zbl 1358.62069
On the fixed parameter tractability of agreement-based phylogenetic distances. (English) Zbl 1354.05129
Matrix group structure and Markov invariants in the strand symmetric phylogenetic substitution model. (English) Zbl 1343.92352
J. Math. Biol. 73, No. 2, 259-282 (2016); correction ibid. 82, No. 7, Paper No. 68, 1 p. (2021).
Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations. (English) Zbl 1330.05150
Modeling the evolution space of breakage fusion bridge cycles with a stochastic folding process. (English) Zbl 1337.92159
Clades and clans: a comparison study of two evolutionary models. (English) Zbl 1327.92037
Reviewer: Yilun Shang (Shanghai)
Finding the best resolution for the Kingman-Tajima coalescent: theory and applications. (English) Zbl 1342.92144
Trinets encode tree-child and level-2 phylogenetic networks. (English) Zbl 1339.92008
Reviewer: I. M. Erusalimskiy (Rostov-on-Don)
Approximating the dynamics of communicating cells in a diffusive medium by ODEs – homogenization with localization. (English) Zbl 1277.35036
Identifiability and inference of non-parametric rates-across-sites models on large-scale phylogenies. (English) Zbl 1276.92082
Reconstructing pedigrees: Some identifiability questions for a recombination-mutation model. (English) Zbl 1258.92030
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