Found 30 Documents (Results 1–30)
Constraint programming approaches for the discretizable molecular distance geometry problem. (English) Zbl 1535.90132
MSC:
90C27
A quantum approach to the discretizable molecular distance geometry problem. (English) Zbl 1508.81482
MSC:
81P68
Integer programming, constraint programming, and hybrid decomposition approaches to discretizable distance geometry problems. (English) Zbl 07549379
MSC:
90-XX
The referenced vertex ordering problem: theory, applications, and solution methods. (English) Zbl 1497.90181
The \(K\)-discretization and \(K\)-incident graphs for discretizable distance geometry. (English) Zbl 1442.90158
MSC:
90C27
An integer programming approach for the search of discretization orders in distance geometry problems. (English) Zbl 1442.90131
A least-squares approach for discretizable distance geometry problems with inexact distances. (English) Zbl 1446.90157
On the estimation of unknown distances for a class of Euclidean distance matrix completion problems with interval data. (English) Zbl 1436.15030
Recent results on assigned and unassigned distance geometry with applications to protein molecules and nanostructures. (English) Zbl 1429.51011
Reviewer: Niko Tratnik (Maribor)
Calculating the possible conformations arising from uncertainty in the molecular distance geometry problem using constraint interval analysis. (English) Zbl 1444.92075
MSC:
92D20
New error measures and methods for realizing protein graphs from distance data. (English) Zbl 1358.05085
Distance geometry on the sphere. (English) Zbl 1482.51009
Akiyama, Jin (ed.) et al., Discrete and computational geometry and graphs. 18th Japan conference, JCDCGG 2015, Kyoto, Japan, September 14–16, 2015. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 9943, 204-215 (2016).
MSC:
51K05
Assigned and unassigned distance geometry: applications to biological molecules and nanostructures. (English) Zbl 1364.51005
Reviewer: Niko Tratnik (Maribor)
Optimal partial discretization orders for discretizable distance geometry. (English) Zbl 1348.90595
MSC:
90C35
Six mathematical gems from the history of distance geometry. (English) Zbl 1362.51002
Reviewer: Adriana Nicolae (Cluj-Napoca)
Optimal discretization orders for distance geometry: a theoretical standpoint. (English) Zbl 1440.68315
Lirkov, Ivan (ed.) et al., Large-scale scientific computing. 10th international conference, LSSC 2015, Sozopol, Bulgaria, June 8–12, 2015. Revised selected papers. Cham: Springer. Lect. Notes Comput. Sci. 9374, 234-242 (2015).
Discretization orders and efficient computation of Cartesian coordinates for distance geometry. (English) Zbl 1302.90177
MSC:
90C27
On the number of realizations of certain Henneberg graphs arising in protein conformation. (English) Zbl 1288.05121
On a relationship between graph realizability and distance matrix completion. (English) Zbl 1375.05124
Migdalas, Athanasios (ed.) et al., Optimization theory, decision making, and operations research applications. Proceedings of the 1st international symposium and 10th Balkan conference on operational research, Thessaloniki, Greece, September 22–25, 2011. New York, NY: Springer (ISBN 978-1-4614-5133-4/hbk; 978-1-4614-5134-1/ebook). Springer Proceedings in Mathematics & Statistics 31, 39-48 (2013).
The interval branch-and-prune algorithm for the discretizable molecular distance geometry problem with inexact distances. (English) Zbl 1272.90074
The discretizable distance geometry problem. (English) Zbl 1258.90100
MSC:
90C35
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