Found 37 Documents (Results 1–37)
The \(K\)-Robinson Foulds measures for labeled trees. (English) Zbl 1530.92154
Jahn, Katharina (ed.) et al., Comparative genomics. 20th international conference, RECOMB-CG 2023, Istanbul, Turkey, April 14–15, 2023. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 13883, 146-161 (2023).
The edge-product space of phylogenetic trees is not shellable. (English) Zbl 1483.05024
Adv. Appl. Math. 135, Article ID 102311, 17 p. (2022); corrigendum ibid. 138, Article ID 102354, 2 p. (2022).
Fast algorithms for the rooted triplet distance between caterpillars. (English) Zbl 07530243
Bampis, Evripidis (ed.) et al., Fundamentals of computation theory. 23rd international symposium, FCT 2021, Athens, Greece, September 12–15, 2021. Proceedings. Cham: Springer. Lect. Notes Comput. Sci. 12867, 327-340 (2021).
MSC:
68Qxx
Rooted NNI moves and distance-1 tail moves on tree-based phylogenetic networks. (English) Zbl 1460.92140
Reviewer: Fatima T. Adylova (Tashkent)
Cubic graphs, their Ehrhart quasi-polynomials, and a scissors congruence phenomenon. (English) Zbl 1458.05113
The Bourque distances for mutation trees of cancers. (English) Zbl 1518.92091
Kingsford, Carl (ed.) et al., 20th international workshop on algorithms in bioinformatics. WABI 2020, September 7–9, 2020, Pisa, Italy, virtual conference. Proceedings. Wadern: Schloss Dagstuhl – Leibniz Zentrum für Informatik. LIPIcs – Leibniz Int. Proc. Inform. 172, Article 14, 22 p. (2020).
The space of tree-based phylogenetic networks. (English) Zbl 1444.92070
MSC:
92D15
The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. (English) Zbl 1410.68172
Consistency and convergence rate of phylogenetic inference via regularization. (English) Zbl 1395.05036
Ricci-Ollivier curvature of the rooted phylogenetic subtree-prune-regraft graph. (English) Zbl 1380.92048
Lost in space? Generalising subtree prune and regraft to spaces of phylogenetic networks. (English) Zbl 1370.92100
Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations. (English) Zbl 1330.05150
Neighborhoods of trees in circular orderings. (English) Zbl 1334.92288
MSC:
92D15
Classification of molecular sequence data using Bayesian phylogenetic mixture models. (English) Zbl 1506.62117
Landscapes on spaces of trees. (English) Zbl 1016.92024
Some notes on the nearest neighbour interchange distance. (English) Zbl 1529.68219
Cai, Jin-Yi (ed.) et al., Computing and combinatorics. Second annual international conference, COCOON ’96, Hong Kong, June 17–19, 1996. Proceedings. Berlin: Springer. Lect. Notes Comput. Sci. 1090, 343-351 (1996).
Reconstructing evolution of sequences subject to recombination using parsimony. (English) Zbl 0692.92014
Approximating minimum-length-sequence metrics: A cautionary note. (English) Zbl 0513.90047
MSC:
90B99
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