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Mathematical analysis of a biochemical oscillator with delay. (English) Zbl 1329.34131

Summary: We analyze a nonlinear delay differential equation (DDE) model with negative feedback and constant time delay. The model is constructed from a previously studied biochemical reaction network of gene transcription and protein synthesis. Linear analysis of the associated DDE model gives a critical time delay beyond which a periodic motion is born in a Hopf bifurcation. The method of multiple scales is then used to analyze the nonlinear system to obtain expressions for the amplitude and frequency of oscillation as a function of the system parameters. We use our closed form analytical expressions to study the importance of a well-balanced ratio between synthesis and degradation rates in the existence of periodic solutions. We show that our theoretical results are in agreement with numerical simulations and with experimental evidence found in the biological literature.

MSC:

34K60 Qualitative investigation and simulation of models involving functional-differential equations
92C40 Biochemistry, molecular biology
34K13 Periodic solutions to functional-differential equations
34K18 Bifurcation theory of functional-differential equations
34K20 Stability theory of functional-differential equations
Full Text: DOI

References:

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