Slow extension of the invading DNA strand in a D-loop formed by RecA-mediated homologous recombination may enhance recognition of DNA homology (Q64387263)

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scientific article published on 11 April 2019

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English	Slow extension of the invading DNA strand in a D-loop formed by RecA-mediated homologous recombination may enhance recognition of DNA homology	scientific article published on 11 April 2019

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30975899%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Slow extension of the invading DNA strand in a D-loop formed by RecA-mediated homologous recombination may enhance recognition of DNA homology (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30975899%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

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DNA recombination

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heteroduplex formation

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Tommy F Tashjian

3

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3 May 2020

author name string

Daniel Lu

1

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3 May 2020

Claudia Danilowicz

2

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3 May 2020

Chantal Prévost

4

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3 May 2020

Veronica G Godoy

5

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3 May 2020

Mara Prentiss

6

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3 May 2020

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publication date

11 April 2019

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3 May 2020

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11

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Journal of Biological Chemistry

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3 May 2020

294

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3 May 2020

21

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3 May 2020

8606-8616

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3 May 2020

The synapsis event in the homologous pairing of DNAs: RecA recognizes and pairs less than one helical repeat of DNA

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https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

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The ATPase activity of RecA is needed to push the DNA strand exchange through heterologous regions

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https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

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Homologous recombination in Escherichia coli: dependence on substrate length and homology

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https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

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inferred from PubMed ID database lookup

Homology requirements for recombination in Escherichia coli

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https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

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Homology-dependent changes in adenosine 5'-triphosphate hydrolysis during recA protein promoted DNA strand exchange: evidence for long paranemic complexes

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https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High Specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of RecA protein spiral filaments in genetic recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RecA tests homology at both pairing and strand exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Instability of repetitive DNA sequences: the role of replication in multiple mechanisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crossing over between regions of limited homology in Escherichia coli. RecA-dependent and RecA-independent pathways

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of DnaE, the Second Replicative DNA Polymerase from Bacillus subtilis, in DNA Mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct evaluation of a kinetic model for RecA-mediated DNA-strand exchange: the importance of nucleic acid dynamics and entropy during homologous genetic recombination.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High fidelity of RecA-catalyzed recombination: a watchdog of genetic diversity

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Motoring along with the bacterial RecA protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inducible SOS response system of DNA repair and mutagenesis in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A major role of the RecFOR pathway in DNA double-strand-break repair through ESDSA in Deinococcus radiodurans

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RecA-mediated homology search as a nearly optimal signal detection system

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A single residue unique to DinB-like proteins limits formation of the polymerase IV multiprotein complex in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential D-loop extension by a translesion DNA polymerase underlies error-prone recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simplified biased random walk model for RecA-protein-mediated homology recognition offers rapid and accurate self-assembly of long linear arrays of binding sites.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA sequence alignment by microhomology sampling during homologous recombination.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The poor homology stringency in the heteroduplex allows strand exchange to incorporate desirable mismatches without sacrificing recognition in vivo.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative genomic analysis of RecA protein binding during DNA double-strand break repair reveals RecBCD action in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integrating multi-scale data on homologous recombination into a new recognition mechanism based on simulations of the RecA-ssDNA/dsDNA structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure/function relationships in RecA protein-mediated homology recognition and strand exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An Overview of the Molecular Mechanisms of Recombinational DNA Repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA Primer Extension Hinders DNA Synthesis by Escherichia coli Mutagenic DNA Polymerase IV.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ATP hydrolysis provides functions that promote rejection of pairings between different copies of long repeated sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA polymerase IV primarily operates outside of DNA replication forks in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The positioning of Chi sites allows the RecBCD pathway to suppress some genomic rearrangements

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Residues in the fingers domain of the translesion DNA polymerase DinB enable its unique participation in error-prone double-strand break repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/30975899

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.RA119.007554

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30975899%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30975899%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30975899%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

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