Temporal Dynamics of Bacterial Communities in Soil and Leachate Water After Swine Manure Application (Q60938552)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

title

Temporal Dynamics of Bacterial Communities in Soil and Leachate Water After Swine Manure Application (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

Michelle L Soupir

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

Thomas B Moorman

series ordinal

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

Fan Yang

series ordinal

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

Adina C Howe

series ordinal

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

language of work or name

English

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publication date

21 December 2018

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Frontiers in Microbiology

18 April 2020

published in

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18 April 2020

volume

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18 April 2020

page(s)

3197

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Creative Commons Attribution 4.0 International

18 April 2020

start time

21 December 2018

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April 2022 Public Data File from Crossref

copyrighted

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describes a project that uses

phyloseq

object named as

R package phyloseq

Phyloseq

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

R package DESeq2

Deseq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

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Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

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16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach

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Microbial population dynamics during startup of a full-scale anaerobic digester treating industrial food waste in Kyoto eco-energy project

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Cross-site soil microbial communities under tillage regimes: fungistasis and microbial biomarkers

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Broad diversity and newly cultured bacterial isolates from enrichment of pig feces on complex polysaccharides

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Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.

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A comparison of methods for clustering 16S rRNA sequences into OTUs

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Bacterial communities in manures of piglets and adult pigs bred with different feeds revealed by 16S rDNA 454 pyrosequencing

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Ribosomal Database Project: data and tools for high throughput rRNA analysis

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Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine

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Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance

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Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization

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Assessment of bacterial and archaeal community structure in Swine wastewater treatment processes.

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

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Characterization of the Fecal Microbial Communities of Duroc Pigs Using 16S rRNA Gene Pyrosequencing

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Genes Indicative of Zoonotic and Swine Pathogens Are Persistent in Stream Water and Sediment following a Swine Manure Spill

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Assessment of Bacterial Community Assembly Patterns and Processes in Pig Manure Slurry

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12 December 2020

Fate and transport of tylosin-resistant bacteria and macrolide resistance genes in artificially drained agricultural fields receiving swine manure.

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A multiplayer game: species of Clostridium, Acinetobacter, and Pseudomonas are responsible for the persistence of antibiotic resistance genes in manure-treated soils.

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Detection of hepatitis E virus and other livestock-related pathogens in Iowa streams

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Response of Soil Properties and Microbial Communities to Agriculture: Implications for Primary Productivity and Soil Health Indicators

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Bacterial Community Composition Associated with Pyrogenic Organic Matter (Biochar) Varies with Pyrolysis Temperature and Colonization Environment.

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Seasonal variation of macrolide resistance gene abundances in the South Fork Iowa River Watershed.

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Different impacts of manure and chemical fertilizers on bacterial community structure and antibiotic resistance genes in arable soils.

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Effects of Spray-Dried Porcine Plasma on Fecal Microbiota in Nursery Pigs

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Assessing Pathogen Presence in an Intensively Tile Drained, Agricultural Watershed

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Identifiers

DOI

10.3389/FMICB.2018.03197

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json

18 April 2020

PubMed publication ID

30627124

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30627124%20AND%20SRC:MED&resulttype=core&format=json