Dual coding potential of a 2',5'-branched ribonucleotide in DNA (Q58562815)

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30 April 2020

title

Dual coding potential of a 2',5'-branched ribonucleotide in DNA (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30361268%20AND%20SRC:MED&resulttype=core&format=json

30 April 2020

Jessica Döring

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30 April 2020

Thomas Hurek

series ordinal

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30 April 2020

language of work or name

English

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publication date

25 October 2018

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30 April 2020

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30 April 2020

volume

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issue

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30 April 2020

page(s)

105-120

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Carbon-13 magnetic resonance spectra of 8-substituted purine nucleosides. Characteristic shifts for the syn conformation

30 April 2020

cites work

1 reference

12 December 2020

NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-Oxo-7H-dG(syn).dA(anti) alignment at lesion site

1 reference

12 December 2020

NMR studies of a DNA containing 8-hydroxydeoxyguanosine

1 reference

12 December 2020

Conformational properties of branched RNA fragments in aqueous solution

1 reference

12 December 2020

Structural requirements of the RNA precursor for the biosynthesis of the branched RNA-linked multicopy single-stranded DNA of Myxococcus xanthus

1 reference

12 December 2020

An RNA processing activity that debranches RNA lariats

1 reference

12 December 2020

Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

1 reference

12 December 2020

Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro

1 reference

12 December 2020

In vivo characterization of yeast mRNA processing intermediates

1 reference

12 December 2020

Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of tetrahymena

1 reference

12 December 2020

Normal and mutant human β-globin pre-mRNAs are faithfully and efficiently spliced in vitro

1 reference

12 December 2020

Polyadenylylated nuclear RNA contains branches

1 reference

12 December 2020

RNA template-directed RNA synthesis by T7 RNA polymerase

1 reference

12 December 2020

Yeast lariat debranching enzyme. Substrate and sequence specificity

1 reference

12 December 2020

Reverse transcriptase reads through a 2'-5'linkage and a 2'-thiophosphate in a template

1 reference

12 December 2020

Polymerase structures and function: variations on a theme?

1 reference

12 December 2020

Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA

1 reference

12 December 2020

X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxoguanine

1 reference

12 December 2020

Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs

1 reference

12 December 2020

Crystal structure of an oligonucleotide duplex containing G.G base pairs: influence of mispairing on DNA backbone conformation

1 reference

12 December 2020

Structural and mechanistic relationships between nucleic acid polymerases

1 reference

12 December 2020

Mixed backbone antisense oligonucleotides: design, biochemical and biological properties of oligonucleotides containing 2'-5'-ribo- and 3'-5'-deoxyribonucleotide segments

1 reference

12 December 2020

Product differentiation by analysis of DNA melting curves during the polymerase chain reaction

1 reference

12 December 2020

Precise branch point mapping and quantification of splicing intermediates

1 reference

12 December 2020

Oxidative Decay of DNA

1 reference

12 December 2020

Protein-nucleic acid interactions and DNA conformation in a complex of human immunodeficiency virus type 1 reverse transcriptase with a double-stranded DNA template-primer

1 reference

12 December 2020

Selection in vitro of novel ribozymes from a partially randomized U2 and U6 snRNA library

1 reference

12 December 2020

Insights into transcription: structure and function of single-subunit DNA-dependent RNA polymerases

1 reference

12 December 2020

DNA replication fidelity

1 reference

12 December 2020

Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA

1 reference

12 December 2020

A new mathematical model for relative quantification in real-time RT-PCR

1 reference

12 December 2020

Multisubunit RNA polymerases

1 reference

12 December 2020

Lariat formation and a hydrolytic pathway in plant chloroplast group II intron splicing

1 reference

12 December 2020

Structure of DNA polymerase beta with the mutagenic DNA lesion 8-oxodeoxyguanine reveals structural insights into its coding potential

1 reference

12 December 2020

Ligase-mediated construction of branched DNA strands: a novel DNA joining activity catalyzed by T4 DNA ligase

1 reference

12 December 2020

RNA branching and debranching in the yeast retrovirus-like element Ty1.

1 reference

12 December 2020

DNA replication fidelity

1 reference

12 December 2020

Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.

1 reference

12 December 2020

Potential influence of the first PCR cycles in real-time comparative gene quantifications

1 reference

12 December 2020

Effect of DNA damage on PCR amplification efficiency with the relative threshold cycle method

1 reference

12 December 2020

An evaluation of detection methods for large lariat RNAs

1 reference

12 December 2020

An mRNA is capped by a 2', 5' lariat catalyzed by a group I-like ribozyme

1 reference

12 December 2020

A lysine residue in the fingers subdomain of T7 DNA polymerase modulates the miscoding potential of 8-oxo-7,8-dihydroguanosine

1 reference

12 December 2020

Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4.

1 reference

12 December 2020

Stabilization and analysis of intron lariats in vivo.

1 reference

12 December 2020

Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion

1 reference

12 December 2020

A new RNA branching activity: the GIR1 ribozyme

1 reference

12 December 2020

DNA supercoiling suppresses real-time PCR: a new approach to the quantification of mitochondrial DNA damage and repair

1 reference

12 December 2020

DNA damage reduces Taq DNA polymerase fidelity and PCR amplification efficiency

1 reference

12 December 2020

Statistical significance of quantitative PCR

1 reference

12 December 2020

Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4

1 reference

12 December 2020

Ty1 reverse transcriptase does not read through the proposed 2',5'-branched retrotransposition intermediate in vitro

1 reference

12 December 2020

Molecular basis of RNA-dependent RNA polymerase II activity

1 reference

12 December 2020

Statistical methods for efficiency adjusted real-time PCR quantification.

1 reference

12 December 2020

Human branch point consensus sequence is yUnAy

1 reference

12 December 2020

Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta

1 reference

12 December 2020

Evolving views of DNA replication (in)fidelity

1 reference

12 December 2020

Serious overestimation in quantitative PCR by circular (supercoiled) plasmid standard: microalgal pcna as the model gene

1 reference

12 December 2020

Binary complex crystal structure of DNA polymerase reveals multiple conformations of the templating 8-oxoguanine lesion

1 reference

12 December 2020

Quantification bias caused by plasmid DNA conformation in quantitative real-time PCR assay

1 reference

12 December 2020

Single-molecule Förster resonance energy transfer reveals an innate fidelity checkpoint in DNA polymerase I

1 reference

12 December 2020

DNA polymerase minor groove interactions modulate mutagenic bypass of a templating 8-oxoguanine lesion

1 reference

12 December 2020

Structural analysis of monomeric retroviral reverse transcriptase in complex with an RNA/DNA hybrid

1 reference

12 December 2020

Altered error specificity of RNase H-deficient HIV-1 reverse transcriptases during DNA-dependent DNA synthesis

1 reference

12 December 2020

Observing a DNA Polymerase Choose Right from Wrong

1 reference

12 December 2020

LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq

1 reference

12 December 2020

Ribonucleotides in DNA: Origins, repair and consequences

1 reference

12 December 2020

Cytosine unstacking and strand slippage at an insertion-deletion mutation sequence in an overhang-containing DNA duplex

1 reference

12 December 2020

Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage

1 reference

12 December 2020

Strand-specific (asymmetric) contribution of phosphodiester linkages on RNA polymerase II transcriptional efficiency and fidelity.

1 reference

12 December 2020

Genome-wide discovery of human splicing branchpoints

1 reference

12 December 2020

Impact of template backbone heterogeneity on RNA polymerase II transcription.

1 reference

12 December 2020

New insights into Hoogsteen base pairs in DNA duplexes from a structure-based survey

1 reference

12 December 2020

Processing ribonucleotides incorporated during eukaryotic DNA replication.

1 reference

12 December 2020

Arm-specific cleavage and mutation during reverse transcription of 2΄,5΄-branched RNA by Moloney murine leukemia virus reverse transcriptase

1 reference

12 December 2020

Conformational Changes in the 5' End of the HIV-1 Genome Dependent on the Debranching Enzyme DBR1 During Early Stages of Infection.

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.068486.118

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30361268%20AND%20SRC:MED&resulttype=core&format=json

30 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30361268%20AND%20SRC:MED&resulttype=core&format=json

30 April 2020

PubMed publication ID

30361268

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30361268%20AND%20SRC:MED&resulttype=core&format=json