CcpA-mediated catabolite activation of the Bacillus subtilis ilv-leu operon and its negation by either CodY- or TnrA-mediated negative regulation. (Q42010233)

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English	CcpA-mediated catabolite activation of the Bacillus subtilis ilv-leu operon and its negation by either CodY- or TnrA-mediated negative regulation.	scientific article

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

CcpA-mediated catabolite activation of the Bacillus subtilis ilv-leu operon and its negation by either CodY- or TnrA-mediated negative regulation (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

Bacillus subtilis

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Kazutake Hirooka

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

author name string

Yasutaro Fujita

1

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13 March 2020

Takenori Satomura

2

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13 March 2020

Shigeo Tojo

3

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13 March 2020

language of work or name

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publication date

25 August 2014

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13 March 2020

number of pages

14

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Journal of Bacteriology

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13 March 2020

196

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13 March 2020

21

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13 March 2020

3793-3806

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13 March 2020

Genome-wide identification of Bacillus subtilis CodY-binding sites at single-nucleotide resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Direct regulation of GTP homeostasis by (p)ppGpp: a critical component of viability and stress resistance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

CcpA forms complexes with CodY and RpoA in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis CodY operators contain overlapping CodY binding sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Regulation of CodY Activity through Modulation of Intracellular Branched-Chain Amino Acid Pools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Carbon catabolite control of the metabolic network in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Molecular mechanisms underlying the positive stringent response of the Bacillus subtilis ilv-leu operon, involved in the biosynthesis of branched-chain amino acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

REQUIREMENTS FOR TRANSFORMATION IN BACILLUS SUBTILIS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Enhancement of glutamine utilization in Bacillus subtilis through the GlnK-GlnL two-component regulatory system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Negative transcriptional regulation of the ilv-leu operon for biosynthesis of branched-chain amino acids through the Bacillus subtilis global regulator TnrA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis LmrA is a repressor of the lmrAB and yxaGH operons: identification of its binding site and functional analysis of lmrB and yxaGH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Activation of the Bacillus subtilis global regulator CodY by direct interaction with branched-chain amino acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Insufficient expression of the ilv-leu operon encoding enzymes of branched-chain amino acid biosynthesis limits growth of a Bacillus subtilis ccpA mutant

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis glutamine synthetase controls gene expression through a protein-protein interaction with transcription factor TnrA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Involvement of two distinct catabolite-responsive elements in catabolite repression of the Bacillus subtilis myo-inositol (iol) operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis CodY represses early-stationary-phase genes by sensing GTP levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Transcriptional activation of the Bacillus subtilis ackA promoter requires sequences upstream of the CcpA binding site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Catabolite regulation of the pta gene as part of carbon flow pathways in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Transcriptional activation of the Bacillus subtilis ackA gene requires sequences upstream of the promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

New protein kinase and protein phosphatase families mediate signal transduction in bacterial catabolite repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

CodY is required for nutritional repression of Bacillus subtilis genetic competence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Possible function and some properties of the CcpA protein of Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

A temporally regulated promoter from Bacillus subtilis is transcribed only by an RNA polymerase with a 37,000 dalton sigma factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Streptococcal phosphoenolpyruvate: sugar phosphotransferase system: purification and characterization of a phosphoprotein phosphatase which hydrolyzes the phosphoryl bond in seryl-phosphorylated histidine-containing protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Identification of an operator sequence for the Bacillus subtilis gnt operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Regulation of histidine and proline degradation enzymes by amino acid availability in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Transcriptional regulation of the ilv-leu operon of Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

5 June 2018

Bacillus subtilis ilvB operon: an intersection of global regulons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

17 August 2018

Rapid isolation of RNA polymerase from sporulating cells of Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4248793

17 August 2018

Purification and in vitro activities of the Bacillus subtilis TnrA transcription factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The identity of the transcription +1 position is crucial for changes in gene expression in response to amino acid starvation in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Positive regulation of Bacillus subtilis ackA by CodY and CcpA: establishing a potential hierarchy in carbon flow

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and characterization of a repressor for the Bacillus subtilis gnt operon

1 reference

https://pubmed.ncbi.nlm.nih.gov/25157083

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.02055-14

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25157083%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

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