The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R. (Q37111415)

18 August 2017

The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R. (English)

1 reference

18 August 2017

José M Andrade

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Eliane Hajnsdorf

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Cecília Maria Arraiano

Cecília M Arraiano

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Philippe Régnier

1 reference

18 August 2017

language of work or name

English

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publication date

22 December 2008

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18 August 2017

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18 August 2017

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18 August 2017

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18 August 2017

316-326

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describes a project that uses

18 August 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2648712/fullTextXML

inferred from PubMed Central ID database lookup

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27 June 2018

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27 June 2018

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27 June 2018

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3 September 2018

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3 September 2018

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3 September 2018

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3 September 2018

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Substrate recognition and catalysis by the exoribonuclease RNase R.

3 September 2018

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3 September 2018

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3 September 2018

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3 September 2018

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3 September 2018

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Exoribonuclease R interacts with endoribonuclease E and an RNA helicase in the psychrotrophic bacterium Pseudomonas syringae Lz4W.

3 September 2018

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The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli.

3 September 2018

1 reference

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The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers.

3 September 2018

1 reference

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3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Inactivation of the decay pathway initiated at an internal site by RNase E promotes poly(A)-dependent degradation of the rpsO mRNA in Escherichia coli.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Genomic analysis in Escherichia coli demonstrates differential roles for polynucleotide phosphorylase and RNase II in mRNA abundance and decay

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Polynucleotide phosphorylase is required for the rapid degradation of the RNase E-processed rpsO mRNA of Escherichia coli devoid of its 3' hairpin.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

PNPase modulates RNase II expression in Escherichia coli: implications for mRNA decay and cell metabolism

3 September 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Differential sensitivities of portions of the mRNA for ribosomal protein S20 to 3'-exonucleases dependent on oligoadenylation and RNA secondary structure.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Cloning and characterization of an Escherichia coli gene, pcnB, affecting plasmid copy number

3 September 2018

1 reference

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mRNA degradation by processive 3'-5' exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648712

Fate of mRNA extremities generated by intrinsic termination: detailed analysis of reactions catalyzed by ribonuclease II and poly(A) polymerase

3 September 2018

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12 December 2020

Exoribonuclease R in Pseudomonas syringae is essential for growth at low temperature and plays a novel role in the 3' end processing of 16 and 5 S ribosomal RNA

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12 December 2020

New Insights into the Mechanism of RNA Degradation by Ribonuclease II

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12 December 2020

Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism

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12 December 2020

Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli

1 reference

12 December 2020

Expression of the Escherichia coli pcnB gene is translationally limited using an inefficient start codon: a second chromosomal example of translation initiated at AUU

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12 December 2020

Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3' stabilizing stem and loop structure

1 reference

12 December 2020

Isolation and characterization of a new temperature-sensitive polynucleotide phosphorylase mutation in Escherichia coli K-12

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12 December 2020

Preferential degradation of polyadenylated and polyuridinylated RNAs by the bacterial exoribonuclease polynucleotide phosphorylase

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12 December 2020

Identifiers

DOI

10.1261/RNA.1197309

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

19103951

1 reference