Transposon integration enhances expression of stress response genes (Q36559305)

14 August 2017

Transposon integration enhances expression of stress response genes (English)

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14 August 2017

Gang Feng

1 reference

14 August 2017

Young-Eun Leem

series ordinal

1 reference

14 August 2017

Henry L Levin

series ordinal

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14 August 2017

language of work or name

English

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publication date

27 November 2012

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14 August 2017

Nucleic Acids Research

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14 August 2017

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14 August 2017

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14 August 2017

775-789

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Creative Commons Attribution-NonCommercial 3.0 Unported

14 August 2017

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyrighted

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cites work

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A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon

30 September 2017

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Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots.

30 September 2017

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Dynamic interactions between transposable elements and their hosts

30 September 2017

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30 September 2017

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Mouse mammary tumor virus molecular biology and oncogenesis

30 September 2017

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Determinants that specify the integration pattern of retrotransposon Tf1 in the fbp1 promoter of Schizosaccharomyces pombe

30 September 2017

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Genomic binding profiling of the fission yeast stress-activated MAPK Sty1 and the bZIP transcriptional activator Atf1 in response to H2O2.

30 September 2017

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High-throughput sequencing of retrotransposon integration provides a saturated profile of target activity in Schizosaccharomyces pombe

30 September 2017

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Retrotransposon overdose and genome integrity.

30 September 2017

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Mammalian cytosine methylation at a glance.

30 September 2017

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MEME SUITE: tools for motif discovery and searching

30 September 2017

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Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping

30 September 2017

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Analyzing real-time PCR data by the comparative C(T) method

30 September 2017

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Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

30 September 2017

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Retrotransposon Tf1 is targeted to Pol II promoters by transcription activators.

30 September 2017

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Chromodomains direct integration of retrotransposons to heterochromatin.

30 September 2017

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SREBP controls oxygen-dependent mobilization of retrotransposons in fission yeast

30 September 2017

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Stress management: how cells take control of their transposons

30 September 2017

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MMTV insertional mutagenesis identifies genes, gene families and pathways involved in mammary cancer.

30 September 2017

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Transposable elements and the epigenetic regulation of the genome

30 September 2017

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The nonsense-mediated decay RNA surveillance pathway

30 September 2017

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Quantifying similarity between motifs

30 September 2017

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Basic methods for fission yeast

30 September 2017

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Aberrant termination triggers nonsense-mediated mRNA decay

30 September 2017

1 reference

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Severe adenine starvation activates Ty1 transcription and retrotransposition in Saccharomyces cerevisiae.

30 September 2017

1 reference

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Happy together: the life and times of Ty retrotransposons and their hosts

30 September 2017

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The significance of responses of the genome to challenge

30 September 2017

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Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L

30 September 2017

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Targeting survival: integration site selection by retroviruses and LTR-retrotransposons

30 September 2017

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Retrotransposons and their recognition of pol II promoters: a comprehensive survey of the transposable elements from the complete genome sequence of Schizosaccharomyces pombe

30 September 2017

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30 September 2017

Integration by design

1 reference

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Controlling integration specificity of a yeast retrotransposon

30 September 2017

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Transcriptional interactions between yeast tRNA genes, flanking genes and Ty elements: a genomic point of view.

30 September 2017

1 reference

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Global transcriptional responses of fission yeast to environmental stress

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

A long terminal repeat retrotransposon of fission yeast has strong preferences for specific sites of insertion

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

The application of a homologous recombination assay revealed amino acid residues in an LTR-retrotransposon that were critical for integration.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

An unusual mechanism of self-primed reverse transcription requires the RNase H domain of reverse transcriptase to cleave an RNA duplex

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Mouse mammary tumor virus infection accelerates mammary carcinogenesis in Wnt-1 transgenic mice by insertional activation of int-2/Fgf-3 and hst/Fgf-4.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

A novel mechanism of self-primed reverse transcription defines a new family of retroelements

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Ty1 transposition in Saccharomyces cerevisiae is nonrandom

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Adjacent pol II and pol III promoters: transcription of the yeast retrotransposon Ty3 and a target tRNA gene

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Demonstration of retrotransposition of the Tf1 element in fission yeast

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

The fission yeast HIRA histone chaperone is required for promoter silencing and the suppression of cryptic antisense transcripts

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Retroviral insertional mutagenesis in murine mammary cancer

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Bursts of retrotransposition reproduced in Arabidopsis

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Host genome surveillance for retrotransposons by transposon-derived proteins

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

New drug-resistant cassettes for gene disruption and epitope tagging in Schizosaccharomyces pombe.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

The origins of gene instability in yeast.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553992

Analysis of a Ty1-less variant ofSaccharomyces paradoxus: the gain and loss of Ty1 elements

21 September 2018

1 reference

12 December 2020

Studies on Transposable Elements in Yeast: I. ROAM Mutations Causing Increased Expression of Yeast Genes: Their Activation by Signals Directed toward Conjugation Functions and Their Formation by Insertion of Tyl Repetitive Elements

1 reference

12 December 2020

Reversion of a promoter deletion in yeast

1 reference

12 December 2020

Integration of the yeast retrotransposon Ty1 is targeted to regions upstream of genes transcribed by RNA polymerase III

1 reference

12 December 2020

Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatin

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKS1185

1 reference

14 August 2017

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14 August 2017

PubMed publication ID

23193295

1 reference