AthaMap, integrating transcriptional and post-transcriptional data (Q33374698)

26 July 2017

title

AthaMap, integrating transcriptional and post-transcriptional data (English)

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26 July 2017

Reinhard Hehl

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Lorenz Bülow

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26 July 2017

Stefan Engelmann

series ordinal

1 reference

26 July 2017

Martin Schindler

series ordinal

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26 July 2017

language of work or name

English

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publication date

8 October 2008

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26 July 2017

published in

Nucleic Acids Research

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26 July 2017

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26 July 2017

issue

Database issue

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26 July 2017

page(s)

D983-6

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Internet Resources for Gene Expression Analysis in Arabidopsis thaliana

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

AthaMap web tools for the analysis and identification of co-regulated genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Beyond microarrays: find key transcription factors controlling signal transduction pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

PathoPlant: a platform for microarray expression data to analyze co-regulated genes involved in plant defense responses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

NCBI GEO: mining tens of millions of expression profiles--database and tools update

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

AthaMap: from in silico data to real transcription factor binding sites.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

MicroRNAS and their regulatory roles in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Post-transcriptional small RNA pathways in plants: mechanisms and regulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

TiProD: the Tissue-specific Promoter Database.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Elucidation of the small RNA component of the transcriptome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

AthaMap web tools for database-assisted identification of combinatorial cis-regulatory elements and the display of highly conserved transcription factor binding sites in Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Control of gene expression during T cell activation: alternate regulation of mRNA transcription and mRNA stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

AthaMap: an online resource for in silico transcription factor binding sites in the Arabidopsis thaliana genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

TRANSFAC: transcriptional regulation, from patterns to profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1.

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN709

MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN709

DNA-binding study identifies C-box and hybrid C/G-box or C/A-box motifs as high-affinity binding sites for STF1 and LONG HYPOCOTYL5 proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN709

PathoPlant: a database on plant-pathogen interactions.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686474

Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinations

31 October 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN709

Athena: a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences

21 January 2018

1 reference

12 December 2020

Database-assisted promoter analysis

1 reference

12 December 2020

AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks

1 reference

12 December 2020

Identification of a consensus DNA-binding site for the Arabidopsis thaliana SBP domain transcription factor, AtSPL14, and binding kinetics by surface plasmon resonance

1 reference

12 December 2020

Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKN709

1 reference

26 July 2017

DBLP publication ID

journals/nar/BulowESH09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

26 July 2017

1 reference