RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression (Q24630966)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21173033%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression (English)

1 reference

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18 January 2020

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18 January 2020

Emilie Lalonde

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18 January 2020

Kevin C H Ha

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18 January 2020

Zibo Wang

1 reference

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18 January 2020

Amandine Bemmo

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18 January 2020

Tony Kwan

1 reference

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18 January 2020

Tomi Pastinen

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18 January 2020

Jacek Majewski

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18 January 2020

language of work or name

English

0 references

publication date

20 December 2010

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18 January 2020

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18 January 2020

volume

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18 January 2020

issue

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18 January 2020

page(s)

545-554

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From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus

18 January 2020

cites work

1 reference

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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Genetic Variation in OAS1 Is a Risk Factor for Initial Infection with West Nile Virus in Man

7 April 2017

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The Sequence Alignment/Map format and SAMtools

7 April 2017

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Alternative isoform regulation in human tissue transcriptomes

7 April 2017

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HTRA1 promoter polymorphism in wet age-related macular degeneration

7 April 2017

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Understanding mechanisms underlying human gene expression variation with RNA sequencing

7 April 2017

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Transcriptome genetics using second generation sequencing in a Caucasian population

7 April 2017

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7 April 2017

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Genetics of gene expression and its effect on disease

7 April 2017

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A genome-wide association study of global gene expression

7 April 2017

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Genetic analysis of genome-wide variation in human gene expression

7 April 2017

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ESEfinder: A web resource to identify exonic splicing enhancers

7 April 2017

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Pre-mRNA splicing and human disease

7 April 2017

1 reference

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Balancing selection maintains a form of ERAP2 that undergoes nonsense-mediated decay and affects antigen presentation

7 April 2017

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A window into third-generation sequencing

27 September 2017

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Alternative expression analysis by RNA sequencing

27 September 2017

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Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations

27 September 2017

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Fine-scale variation and genetic determinants of alternative splicing across individuals

27 September 2017

1 reference

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Global patterns of cis variation in human cells revealed by high-density allelic expression analysis

27 September 2017

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27 September 2017

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Tissue effect on genetic control of transcript isoform variation

27 September 2017

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Expression quantitative trait loci detected in cell lines are often present in primary tissues

27 September 2017

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27 September 2017

1 reference

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27 September 2017

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High-resolution mapping of expression-QTLs yields insight into human gene regulation

27 September 2017

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27 September 2017

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Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus

27 September 2017

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27 September 2017

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OAS1 gene haplotype confers susceptibility to multiple sclerosis.

27 September 2017

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Influence of human genome polymorphism on gene expression

27 September 2017

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Mapping determinants of human gene expression by regional and genome-wide association

27 September 2017

1 reference

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Variation in antiviral 2',5'-oligoadenylate synthetase (2'5'AS) enzyme activity is controlled by a single-nucleotide polymorphism at a splice-acceptor site in the OAS1 gene

27 September 2017

1 reference

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Effect of polymorphisms within probe-target sequences on olignonucleotide microarray experiments

27 September 2017

1 reference

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Functional intronic polymorphisms: Buried treasure awaiting discovery within our genes

27 September 2017

1 reference

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Autosomal recessive spastic paraplegia (SPG45) with mental retardation maps to 10q24.3-q25.1.

30 May 2018

1 reference

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Systematic evaluation of the effect of common SNPs on pre-mRNA splicing.

28 November 2018

1 reference

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Genome-wide analysis of transcript isoform variation in humans

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065702

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065702

OAS1 Splice Site Polymorphism Controlling Antiviral Enzyme Activity Influences Susceptibility to Type 1 Diabetes

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21173033

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21173033

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.111211.110

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21173033%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21173033%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

21173033

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21173033%20AND%20SRC:MED&resulttype=core&format=json