Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements (Q21563646)

8 September 2022

William Martin

William

Martin

1 reference

8 September 2022

Jessica Vamathevan

Jessica

Vamathevan

1 reference

8 September 2022

Martin Wu

Martin

1 reference

8 September 2022

William C Nelson

William C

Nelson

1 reference

8 September 2022

Scott L O'Neill

Scott L

O'Neill

1 reference

8 September 2022

Ian T Paulsen

Ian T

Paulsen

1 reference

8 September 2022

Teresa Utterback

Teresa

Utterback

1 reference

8 September 2022

James F Kolonay

James F

Kolonay

1 reference

8 September 2022

Lauren M Brinkac

Lauren M

Brinkac

1 reference

8 September 2022

Sean C Daugherty

Sean C

Daugherty

1 reference

8 September 2022

A Scott Durkin

A Scott

Durkin

1 reference

8 September 2022

Karen E Nelson

Karen E

Nelson

1 reference

8 September 2022

Ramana Madupu

Ramana

Madupu

1 reference

8 September 2022

Robert

Deboy

Robert Deboy

1 reference

8 September 2022

Elizabeth A

McGraw

Elizabeth A McGraw

1 reference

8 September 2022

Markus

Riegler

Markus Riegler

1 reference

8 September 2022

Ling V Sun

Ling V

Sun

1 reference

8 September 2022

Jeremy C Brownlie

Jeremy C

Brownlie

1 reference

8 September 2022

Christian Esser

Christian

Esser

1 reference

8 September 2022

Nahal Ahmadinejad

Nahal

Ahmadinejad

1 reference

8 September 2022

Christian Wiegand

Christian

Wiegand

1 reference

8 September 2022

Maureen J Beanan

Maureen J

Beanan

1 reference

8 September 2022

Yasmin Mohamoud

Yasmin

Mohamoud

1 reference

8 September 2022

Perris Lee

Perris

Lee

1 reference

8 September 2022

Kristi Berry

Kristi

Berry

1 reference

8 September 2022

M Brook Young

M Brook

Young

1 reference

8 September 2022

Janice Weidman

Janice

Weidman

1 reference

8 September 2022

William C Nierman

William C

Nierman

1 reference

8 September 2022

Hervé Tettelin

Hervé

Tettelin

1 reference

Creative Commons Attribution 4.0 International

8 September 2022

language of work or name

English

0 references

publication date

March 2004

0 references

0 references

0 references

0 references

E69

0 references

start time

16 March 2004

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

describes a project that uses

MUMmer

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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19 March 2017

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Molecular archaeology of the Escherichia coli genome

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Accelerated evolution and Muller's rachet in endosymbiotic bacteria

19 March 2017

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19 March 2017

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Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia

19 March 2017

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50 Million Years of Genomic Stasis in Endosymbiotic Bacteria

19 March 2017

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Genome sequence of Yersinia pestis, the causative agent of plague

19 March 2017

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Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae

19 March 2017

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Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

19 March 2017

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The genome sequence of Rickettsia prowazekii and the origin of mitochondria

19 March 2017

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Reorganization of genera in the families Rickettsiaceae and Anaplasmataceae in the order Rickettsiales: unification of some species of Ehrlichia with Anaplasma, Cowdria with Ehrlichia and Ehrlichia with Neorickettsia, descriptions of six new species

19 March 2017

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Type IV secretion: intercellular transfer of macromolecules by systems ancestrally related to conjugation machines

19 March 2017

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Alignment of whole genomes

19 March 2017

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Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

19 March 2017

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Gastrogenomic delights: a movable feast

19 March 2017

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Evolution of the chaperonin families (Hsp60, Hsp10 and Tcp-1) of proteins and the origin of eukaryotic cells

19 March 2017

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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

19 March 2017

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Neighbor-net: an agglomerative method for the construction of phylogenetic networks

7 April 2017

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Mechanisms of evolution in Rickettsia conorii and R. prowazekii

7 April 2017

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Amelioration of bacterial genomes: rates of change and exchange

7 April 2017

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7 April 2017

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Recovering evolutionary trees under a more realistic model of sequence evolution

7 April 2017

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Development of a physical and genetic map of the virulent Wolbachia strain wMelPop

12 September 2017

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Ehrlichia chaffeensis and Anaplasma phagocytophilum lack genes for lipid A biosynthesis and incorporate cholesterol for their survival

12 September 2017

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Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

12 September 2017

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Phylogenomics: intersection of evolution and genomics

12 September 2017

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Mitochondrial connection to the origin of the eukaryotic cell

12 September 2017

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Acceleration of genomic evolution caused by enhanced mutation rate in endocellular symbionts.

12 September 2017

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Ankyrins, multifunctional proteins involved in many cellular pathways

12 September 2017

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Genome deterioration: loss of repeated sequences and accumulation of junk DNA.

12 September 2017

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Phylogenetic analysis and gene functional predictions: phylogenomics in action

12 September 2017

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Catalyzing bacterial speciation: correlating lateral transfer with genetic headroom

12 September 2017

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A new insight into the pathogenesis of filarial disease

12 September 2017

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Role of delayed nuclear envelope breakdown and mitosis in Wolbachia-induced cytoplasmic incompatibility

12 September 2017

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A new approach to the treatment of filariasis

12 September 2017

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Type IVB secretion by intracellular pathogens

12 September 2017

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The decaying genome of Mycobacterium leprae

12 September 2017

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Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori

12 September 2017

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Deletional bias and the evolution of bacterial genomes

12 September 2017

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Rickettsiaceae, rickettsia-like endosymbionts, and the origin of mitochondria

12 September 2017

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Microbial genes in the human genome: lateral transfer or gene loss?

12 September 2017

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Determination of Wolbachia genome size by pulsed-field gel electrophoresis

12 September 2017

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Genes for the type IV secretion system in an intracellular symbiont, Wolbachia, a causative agent of various sexual alterations in arthropods

12 September 2017

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Heat shock protein 60 sequence comparisons: duplications, lateral transfer, and mitochondrial evolution

12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

ankA: an Ehrlichia phagocytophila group gene encoding a cytoplasmic protein antigen with ankyrin repeats

12 September 2017

1 reference

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Phylogeny of 33 ribosomal and six other proteins encoded in an ancient gene cluster that is conserved across prokaryotic genomes: influence of excluding poorly alignable sites from analysis.

12 September 2017

1 reference

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A phylogenomic study of DNA repair genes, proteins, and processes

12 September 2017

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The genome of Rickettsia prowazekii and some thoughts on the origin of mitochondria and hydrogenosomes

12 September 2017

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Mosaic bacterial chromosomes: a challenge en route to a tree of genomes

12 September 2017

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Cloning and characterization of a gene encoding the major surface protein of the bacterial endosymbiont Wolbachia pipientis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

Drosophila PLUTONIUM protein is a specialized cell cycle regulator required at the onset of embryogenesis

12 September 2017

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A new strategy for genome sequencing

12 September 2017

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The chaperone connection to the origins of the eukaryotic organelles

12 September 2017

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Escherichia coli mfd mutant deficient in "mutation frequency decline" lacks strand-specific repair: in vitro complementation with purified coupling factor

12 September 2017

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In vitro cultivation of Wolbachia pipientis in an Aedes albopictus cell line

12 September 2017

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Phylogenetic affinity of aGiardia lambliacysteine desulfurase conforms to canonical pattern of mitochondrial ancestry

27 September 2017

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Sequencing and analysis of a 63 kb bacterial artificial chromosome insert from the Wolbachia endosymbiont of the human filarial parasite Brugia malayi

30 May 2018

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Long PCR improves Wolbachia DNA amplification: wsp sequences found in 76% of sixty-three arthropod species

30 May 2018

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REPuter: fast computation of maximal repeats in complete genomes.

30 May 2018

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Evidence for genetic drift in endosymbionts (Buchnera): analyses of protein-coding genes.

30 May 2018

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A phylogenetic analysis of the cytochrome b and cytochrome c oxidase I genes supports an origin of mitochondria from within the Rickettsiaceae.

30 May 2018

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Phylogeny and PCR-based classification of Wolbachia strains using wsp gene sequences.

30 May 2018

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Microbial genome analyses: global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities

30 May 2018

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Interspecific and intraspecific horizontal transfer of Wolbachia in Drosophila

30 May 2018

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How many wolbachia supergroups exist?

30 May 2018

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Rickettsia-like mitochondrial motility in Drosophila spermiogenesis

21 January 2018

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Wolbachia infections of tephritid fruit flies: molecular evidence for five distinct strains in a single host species

29 November 2018

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Wolbachia-mediated sperm modification is dependent on the host genotype in Drosophila.

29 November 2018

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Mathematical elegance with biochemical realism: the covarion model of molecular evolution

29 November 2018

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Genes lost during evolution.

29 November 2018

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Bacteriophage WO and virus-like particles in Wolbachia, an endosymbiont of arthropods

29 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

Wolbachia infection frequencies in insects: evidence of a global equilibrium?

29 November 2018

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Microbial genome analyses: comparative transport capabilities in eighteen prokaryotes 1 1Edited by G. von Heijne

29 November 2018

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Wolbachia bacteria of filarial nematodes: a target for control?

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

Optimized multiplex PCR: efficiently closing a whole-genome shotgun sequencing project.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

An ancestral mitochondrial DNA resembling a eubacterial genome in miniature

29 November 2018

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Roots: Mutation frequency decline revisited

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

Preparation, molecular weight, base composition, and secondary structure of giant nuclear ribonucleic acid

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=368164

Model of amino acid substitution in proteins encoded by mitochondrial DNA

29 November 2018

1 reference

12 December 2020

Evolutionary relationship of Rickettsiae and mitochondria

1 reference

12 December 2020

Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates

1 reference

12 December 2020

A comparative genomics approach to the evolution of eukaryotes and their mitochondria

1 reference

12 December 2020

Mosaic bacterial chromosomes: a challenge en route to a tree of genomes

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0020069

7 January 2021

inferred from DOI database lookup

The genome of Rickettsia prowazekii and some thoughts on the origin of mitochondria and hydrogenosomes

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0020069

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PBIO.0020069

1 reference

1 reference

1 reference

1 reference