Predloga:Chembox Jmol
Template {{Chembox}} is an infobox for chemicals. It has a large number of options to add relevant data and images. The infobox is organized in sections like "identifiers" and "hazards".
Usage
[uredi kodo]The Chembox has a modular design. After the general information like the chemical name and images, it can be built from multiple sections, each covering a group of information (like "pharmacology"). Depending on the compound, sections can be added or left out, and within a section parameters can be added or omitted (left blank).
The sections and their parameters are listed below.
Within the general chembox template (with its own parameters like |ImageFile= and |IUPACName=), each section is added with this pattern (as the value of a parameter |Sectionx=.
{{Chembox
| ImageFile =
| IUPACName =
<!-- more general Chembox parameters here -->
| Section1 = {{Chembox Identifiers
| CASNo =
| PubChem =
<!-- more Identifier parameters here -->
}}
}}
In this format, spaces and new lines have no meaning and can be used freely to separate sections (though within a data value, a space has a meaning, except generally leading and trailing spaces).
Each section has its own number in |Section#=. Then a section is defined with "|Section# = {{Chembox " and ends with "}}". Sections cannot 'nest': one must close one section with }} before adding another |Section#= {{Chembox ....
Keep in mind the advice in the main Infobox documentation to use the {{Unbulleted list}} template to present multiple values for a parameter so as to ensure that the values are each started on a new line and tagged appropriately in the underlying markup. This is particularly important with parameters like |OtherNames=, since many names use commas within them, and using commas as separators leads to ambiguity. For example:
| OtherNames = {{Unbulleted list
| 2,4,6(1''H'',3''H'',5''H'')-pyrimidinetrione
| 2,4,6-trioxohexahydropyrimidine
| pyrimidinetriol
| malonylurea
| 6-hydroxyuracil
| ''N'',''N''-(1,3-dioxo-1,3-propanediyl)urea
}}
| (next parameter) = <!-- etc. -->
Small, simple form
[uredi kodo]To use, simply copy and paste the left column into the document, filling in whatever you can, and save:
{{Chembox
<!-- Images -->
| ImageFile =
| ImageSize =
| ImageAlt =
<!-- Names -->
| IUPACName =
| OtherNames =
<!-- Sections -->
| Section1 = {{Chembox Identifiers
| CASNo =
| PubChem =
| SMILES =
}}
| Section2 = {{Chembox Properties
| Formula =
| MolarMass =
| Appearance =
| Density =
| MeltingPt =
| BoilingPt =
| Solubility =
}}
| Section3 = {{Chembox Hazards
| MainHazards =
| FlashPt =
| AutoignitionPt =
}}
}}
|
Medium form
[uredi kodo]To use, simply copy and paste the left column into the document, filling in whatever you can:
{{Chembox
| Reference =
<!-- Names -->
| Name =
| IUPACName =
| PIN =
| SystematicName = not
| OtherNames = {{Unbulleted list
| ''name1''
| ''name2''
...
| ''name50''
}}
| data page pagename =
<!-- Images -->
| ImageFile =
| ImageSize =
| ImageAlt =
| ImageName =
| ImageCaption =
| ImageFile1 =
| ImageSize1 =
| ImageAlt1 =
| ImageName1 =
| ImageCaption1 =
| ImageFile2 =
| ImageSize2 =
| ImageAlt2 =
| ImageName2 =
| ImageCaption2 =
| ImageFile3 =
| ImageSize3 =
| ImageAlt3 =
| ImageName3 =
| ImageFileL1 =
| ImageSizeL1 =
| ImageAltL1 =
| ImageNameL1 =
| ImageFileR1 =
| ImageSizeR1 =
| ImageAltR1 =
| ImageNameR1 =
| ImageFileL2 =
| ImageSizeL2 =
| ImageAltL2 =
| ImageNameL2 =
| ImageFileR2 =
| ImageSizeR2 =
| ImageAltR2 =
| ImageNameR2 =
<!-- Sections -->
| Section1 = {{Chembox Identifiers
| 3DMet =
| Abbreviations =
| Beilstein =
| CASNo =
| CASNo_Comment =
| CASOther =
| ChEBI =
| ChemSpiderID =
| EINECS =
| EC_number =
| EC_number_Comment =
| Gmelin =
| InChI =
| KEGG =
| MeSHName =
| PubChem =
| RTECS =
| SMILES =
| UNNumber =
}}
| Section2 = {{Chembox Properties
| AtmosphericOHRateConstant =
| Appearance =
| BoilingPt =
| BoilingPtC =
| BoilingPt_ref =
| BoilingPt_notes =
| Density =
| Formula =
| HenryConstant =
| LogP =
| MolarMass =
| MeltingPt =
| MeltingPtC =
| MeltingPt_ref =
| MeltingPt_notes =
| pKa =
| pKb =
| Solubility =
| SolubleOther =
| Solvent =
| VaporPressure =
}}
| Section3 = {{Chembox Structure
| Coordination =
| CrystalStruct =
| MolShape =
}}
| Section4 = {{Chembox Thermochemistry
| DeltaGf =
| DeltaHc =
| DeltaHf =
| Entropy =
| HeatCapacity =
}}
| Section5 = {{Chembox Explosive
| ShockSens =
| FrictionSens =
| DetonationV =
| REFactor =
}}
| Section6 = {{Chembox Pharmacology
| ATCvet =
| ATCCode_prefix =
| ATCCode_suffix =
| ATC_Supplemental =
| AdminRoutes =
| Bioavail =
| Excretion =
| HalfLife =
| Metabolism =
| Legal_status =
| Legal_AU =
| Legal_AU_comment =
| Legal_CA =
| Legal_CA_comment =
| Legal_NZ =
| Legal_NZ_comment =
| Legal_US = Rx-only
| Legal_US_comment =
| Legal_UK =
| Legal_UK_comment =
| Legal_EU =
| Legal_EU_comment =
| Legal_UN =
| Legal_UN_comment =
| Pregnancy_category =
| Pregnancy_AU =
| Pregnancy_AU_comment =
| Pregnancy_US =
| Pregnancy_US_comment =
| ProteinBound =
| Dependence_liability =
| Addiction_liability =
}}
| Section7 = {{Chembox Hazards
| AutoignitionPt =
| ExploLimits =
| FlashPt =
| LD50 =
| LC50 =
| MainHazards =
| NFPA-F =
| NFPA-H =
| NFPA-R =
| NFPA-S =
| PEL =
| REL =
| ExternalSDS =
| GHSPictograms =
| GHSSignalWord =
| HPhrases =
| PPhrases =
}}
| Section9 = {{Chembox Related
| OtherAnions =
| OtherCations =
| OtherFunction =
| OtherFunction_label =
| OtherCompounds =
}}
}}
|
.
Reference, use Title (default: article name) IUPAC name The prefered name The systematic name(s) Any other name(s) . . . . . A non-default data page name (default, eg for ammonia: "[[Ammonia (podatkovna stran)]]") Like filename.svg (not [[file:filename.svg]]) Picture width (default=220px; example: ImageSize=100px) Alt text for picture (example: Fine dry white powder) Image link title Picture caption (example: Oxygen in liquid form) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Any abbreviations CAS Number, links to eMolecules
EINECS, links to ecb; URL is http://ecb.jrc.it/esis/index.php?GENRE=ECNO&ENTREE= EINECS, links to ecb, different URL http://ecb.jrc.it/esis/index.php?GENRE=CASNO&ENTREE=
{{Chembox Structure}}: crystal structure Coordination Crystal structure Molecular shape {{Chembox Thermochemistry}} Delta Gf Delta Hc Delta Hf Entropy Heat capacity {{Chembox Explosive}} Shock sensitivity Friction sensitivity Explosive velocity Relative effectiveness factor {{Chembox Pharmacology}}: drug data ATCvet=yes if the next two parameters define an ATCvet code ATCCode prefix (first three characters, omit the leading Q for ATCvet codes), internal link ATCCode suffix (last 4 characters), full ATC links to WHO C.C. Other ATC codes (use the {{ATC}} and/or {{ATCvet}} templates) Admin Routes Bioavailability Excretion Half Life Metabolism Legal status Legal status in AU Legal status in CA Legal status in NZ Legal status in US Legal status in UK Legal status in EU Legal status in UN Pregnancy Category Pregnancy Category in AU Pregnancy Category in US Protein Bound
{{Chembox Hazards}} Autoignition temperature Explosion limits Flash point LD50 LC50 Main hazards NFPA-F: Fire hazard 0–4 (red) NFPA-H: Health hazard 0–4 (blue) NFPA-R: Reactivity hazard 0–4 (yellow) NFPA-S: Special hazards (aka Other; white): W, OX, COR, ALK, ACID, CRYO, RA PEL URL for Safety data sheet
{{Chembox Related}}: related substances Other anions Other cations Other compounds with a given function The given functionOther compounds: adds a chemical 'see also' section |
Full form
[uredi kodo]To use, simply copy and paste the left column into the document, and press save to get an empty Chembox:
Long parameter list for {{Chembox}}
| ||
|---|---|---|
|
Sections parameter lists may be incomplete
|
Indexed parameters
[uredi kodo]| CASNo = | CASNo1 = | CASNo2 = | CASNo3 = | CASNo4 = | CASNo5 = | CASNoOther =
Indexed parameters
|
|---|
|
Overview | CASNo = | CASNo1 = | CASNo5 = | CASNoOther = | ChEBI = | ChEBI1 = | ChEBI5 = | ChEBIOther = | ChEMBL = | ChEMBL1 = | ChEMBL5 = | ChEMBLOther = | ChemSpiderID = | ChemSpiderID1 = | ChemSpiderID5 = | ChemSpiderIDOther = | DrugBank = | DrugBank1 = | DrugBank5 = | DrugBankOther = | InChI = | InChI1 = | InChI5 = | InChIOther = | KEGG = | KEGG1 = | KEGG5 = | KEGGOther = | PubChem = | PubChem1 = | PubChem5 = | PubChemOther = | SMILES = | SMILES1 = | SMILES5 = | SMILESOther = | UNII = | UNII1 = | UNII5 = | UNIIOther = | 3DMet= | 3DMet1= | 3DMet5= | 3DMetOther= | EC_number1= | EC_number5= | EC_numberOther= | RTECS1= | RTECS5= | RTECSOther= |
Indexed parameters take indexes 'blank', 1–5 (six options together). They should have straight input, such as a correct CAS Registry Number.
- Eight base parameters are indexed this way, all identifiers:
CASNo, ChEBI, ChEMBL, ChemSpiderID, DrugBank, InChI, KEGG, PubChem, SMILES, UNII, 3DMet, EC_number, RTECS
- Then
|_Other=(like|CASNoOther=) is available for free text input.
same substance, same index
[uredi kodo]When the chembox has multiple substances, you can use the index. Make sure that |CASNo3= and |SMILES3= are about the same substance, and |CASNo3= and |SMILES2= are not. Treat index "0" the same way:
|CASNo=is|InChI=is|SMILES=|CASNo1=is|InChI1=is|SMILES1=|CASNo=is not|InChI1=is not|SMILES4=
Labeling the substances
[uredi kodo]By using a parameter like |index2_label=, you can prefix every #2-input with that same prefix.
{{chembox
| Name=[[Linalool]]
|Section1={{Chembox Identifiers
| index_label =
| index1_label = (''R'')
| index2_label = (''S'')
| index_comment = (+/-)-linalool
| index1_comment = (-)-linalool
| index2_comment = (+)-linalool
| CASNo = 78-70-6
| CASNo1 = 126-91-0
| CASNo2 = 126-90-9
| PubChem = 6549
| PubChem1 = 443158
| PubChem2 = 67179
}}
}}
| Identifikatorji | |
|---|---|
| |
PubChem CID
|
|
| CASNo_Comment = | CASNo1_Comment = | CASNo5_Comment =
- For specific additions, each parameter has a
|_Comment=option.
Section subtemplates
[uredi kodo]The following section subtemplates are available:
- {{Chembox Identifiers}}
- {{Chembox Properties}}
- {{Chembox Structure}}
- {{Chembox Thermochemistry}}
- {{Chembox Explosive}}
- {{Chembox Pharmacology}}
- {{Chembox Hazards}}
- {{Chembox Related}}
And the automated section, that is visible when 'pagename (podatkovna stran)' exists:
See these subsections for their parameter options.
The order of these sections in the infobox is set by the section number (|Section#=) only. Not by the typed sequence. This documentation keeps this arbitrary order:
| Section1 = {{Chembox Identifiers}}
| Section2 = {{Chembox Properties}}
| Section3 = {{Chembox Structure}}
| Section4 = {{Chembox Thermochemistry}}
| Section5 = {{Chembox Explosive}}
| Section6 = {{Chembox Pharmacology}}
| Section7 = {{Chembox Hazards}}
| Section9 = {{Chembox Related}}
Sections that are not used can be safely removed, renumbering is not necessary.
Container only
[uredi kodo]{{Chembox}} can be used to show a subsection only, for example Section3={{Chembox Hazards|...}}. When set |container_only=yes: The main {{Chembox}} is not tracked at all (image checks, bot validation categories, etc.), and the Footer (with STP notice) is suppressed. Example: Bromine#Biological role and toxicity. The article will be listed in Kategorija:Category:Chembox container only (0).
Adding images
[uredi kodo]Parameters
[uredi kodo]Image parameters for the first images:
{{Chembox
<!-- Other chembox parameters can go here -->
<!-- Row 1/7 -->
| ImageFile =
| ImageName =
| ImageSize =
| ImageAlt =
| ImageCaption =
| ImageFile_Ref =
<!-- Row 2/7 -->
| ImageFile1 =
| ImageName1 =
| ImageSize1 =
| ImageAlt1 =
| ImageCaption1 =
| ImageFile1_Ref =
<!-- Row 3/7 -->
| ImageFileL1 =
| ImageNameL1 =
| ImageSizeL1 =
| ImageAltL1 =
| ImageCaptionL1 =
| ImageFileL1_Ref =
| ImageFileR1 =
| ImageNameR1 =
| ImageSizeR1 =
| ImageAltR1 =
| ImageCaptionR1 =
| ImageFileR1_Ref =
| ImageCaptionL1R1 =
<!-- More chembox parameters can go here, like |Section1=... -->
}}
Examples
[uredi kodo]Image parameters for an image (example: File1). All are optional.
 A caption shows here
|
{{Chembox
| ImageFile1 = Furfural.svg
| ImageAlt1 = Skeleton formula of a ring of four carbons and one oxygen, with a carbon-oxygen attached to a carbon next to an oxygen
| ImageName1 =
| ImageCaption1 = A caption shows here
| ImageSize1 =
| ImageFile1_Ref =ref
}}
Adding two images:
|
| |
|
{{Chembox
| ImageFile = Furfural.svg
| ImageAlt = Skeleton formula of a ring of four carbons and one oxygen, with a carbon-oxygen attached to a carbon next to an oxygen
| ImageFile1 = Furfural-3D-vdW.png
| ImageAlt1 = 3D filled-sphere model of the same molecule
}}
This gives two images, each image on his own row (note, ImageFile is the first image, ImageFile1 is the second).
Adding two images, side by side (L1 and R1):
| |||
{{Chembox
| ImageFileL1 = Furfural.svg
| ImageAltL1 = Skeleton formula of a ring of four carbons and one oxygen, with a carbon-oxygen attached to a carbon next to an oxygen
| ImageFileR1 = Furfural-3D-vdW.png
| ImageAltR1 = 3D filled-sphere model of the same molecule
}}
This gives one row with two images. Note that ImageFile is now not supplied.
Multiple images
[uredi kodo]| Chembox image ordering () | ||
|---|---|---|
| row 1 | ImageFile | |
| row 2 | ImageFile1 | |
| row 3 | ImageFileL1 | ImageFileR1 |
| row 5 | ImageFile2 | |
| row 4 | ImageFileL2 | ImageFileR2 |
| row 6 | ImageFile3 | |
| row 7 | ImageFileL3 | ImageFileR3 |
This gives the possibility to play a bit with which image is first (rows with empty parameters are not displayed). Example:
| |||
| |||
| Imena | |||
|---|---|---|---|
| IUPAC ime
example
| |||
| Sklici infopolja | |||
{{Chembox
| ImageFileL1 = Furfural.svg
| ImageAltL1 = Skeleton formula of a ring of four carbons and one oxygen, with a carbon-oxygen attached to a carbon next to an oxygen
| ImageFileR1 = Furfural-3D-vdW.png
| ImageSizeR1 =
| ImageAltR1 = 3D filled-sphere model of the same molecule
| ImageFile2 = Water droplet blue bg05.jpg
| ImageAlt2 = Water droplet erupting from the center of a concentric ring of ripples, evidently in response to a drop landing in the water just before
| IUPACName = example
}}
This gives one row with two images, and one row with one image.
Names
[uredi kodo]
{{Chembox
<!-- Names -->
| Name =
| IUPACName =
| IUPACNames =
| PIN =
| SystematicName =
| OtherNames =
<!-- other parameters -->
}}
|
scroll| Infobox title (Pagetitle is default) IUPAC name Using -s makes section header plural Preferred IUPAC name Systematic IUPAC name List of all other name(s) |
Example
[uredi kodo]| Imena | |
|---|---|
| IUPAC imes
A, B
| |
| Priporočeno IUPAC ime
PIN | |
| Sistematično ime
SYS | |
| Druga imena
X
Y Z |
{{Chembox
| Name=''cis''-3-Hexen-1-ol
| IUPACNames = A, B
| PIN = PIN
| SystematicName = SYS
| OtherNames = X<br/>Y<br/>Z
}}
Input from Wikidata
[uredi kodo]E number, ECHA InfoCard ID, |DTXSID= (CompTox Chemicals Dashboard) are read from Wikidata.
Maintenance
[uredi kodo]Troubleshooting
[uredi kodo]- When supplying a parameter with a value, and nothing or the wrong value shows up, check:
- Is the parameter placed in the correct section?
- Are the sections properly defined? Sections start with | Section# = {{Chembox sectionname |" and end with "}}".
- Is there inconsistency in the Section numbering? Available numbers for sections are 1 – 9.
Sledilne kategorije
[uredi kodo]- Kategorija:Chembox vzdrževalne kategorije (28)
- Kategorija:Kemijski članki z neznanim parametrom v Chembox (295)
TemplateData
[uredi kodo]TemplateData documentation used by VisualEditor and other tools
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Glejte mesečno poročilo o uporabi parametrov za to predlogo.
TemplateData za Chembox Jmol An infobox for chemicals. It has a large number of options to add relevant data and images. The Chembox has a modular design. After the general information like the chemical name and images, it can be built from multiple sections, each covering a group of information (like "pharmacology"). Depending on the compound, sections can be added or left out, and within a section parameters can be added or omitted (left blank). Please see this template's page for full documentation.
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See also
[uredi kodo]- {{Infobox drug}} (aka {{Drugbox}})