⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

🌸 Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.

A route planner for DNA assembly

A PCR primer tool for DNA assembly flows

🎨 Python library to plot multi-part genetic constructs

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

a DNA assembly library

💫 Computer-aided DNA assembly validation and identification from restriction digests.

Batch domestication of genetic parts with Python

Fake genomes, fake sequencing, real insights.

🐾 DNA overhang misannealing data for Python

🔗 Short overhangs design for DNA assembly

🔮 Predict DNA assembly clone validity rates - powered by Kappa

The repository contains the source code of the NanoForms server (Czmil et al. NanoForms: an integrated server for processing, analysis and assembly of raw sequencing data of microbial genomes, from Oxford Nanopore technology. PeerJ, 2022). It is meant to be the source for standalone server installation. https://doi.org/10.7717/peerj.13056

✂️ Design compact restriction sites arrays (python utility)

👉 EGF Design and Build, the Foundry's DNA design ordering portal

📚 Shared slideshows, courses, etc. from the EGF

DNAda is a web application that integrates the J5 DNA assembly software with robotic liquid handlers

Download the full iGEM database of parts

Open source web app for DNA design and management