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Ripser.py

swMATH ID: 32793
Software Authors: Tralie, Christopher; Saul, Nathaniel; Bar-On, Rann
Description: Ripser.py is a lean persistent homology package for Python. Building on the blazing fast C++ Ripser package as the core computational engine, Ripser.py provides an intuitive interface for: computing persistence cohomology of sparse and dense data sets, visualizing persistence diagrams, computing lowerstar filtrations on images, and computing representative cochains. We supply a large set of interactive notebooks that demonstrate how to take advantage of all the features available. Ripser.py is an evolution of the original C++ Ripser project. We have put extensive work into making the package available to Python developers across all major platforms. If you are having trouble installing, please let us know by opening a github issue.
Homepage: http://ripser.scikit-tda.org
Source Code:  https://github.com/scikit-tda/ripser.py
Dependencies: Python
Keywords: Topological data analysis; TDA; Persistent Homology; Python; Journal of Open Source Software; JOSS
Related Software: Ripser; Scikit; GitHub; PersistenceImages; t-SNE; Gudhi; Eirene; SW1PerS; SciPy; Python; TensorFlow; giotto-tda; Scikit-tda; COIL-100; UMAP; Ripser++; Flagser; PersistenceDiagrams.jl; ComputationalHomology.jl; Sparips.jl
Cited in: 15 Documents

Standard Articles

1 Publication describing the Software Year
Ripser.py: A Lean Persistent Homology Library for Python Link
Christopher Tralie, Nathaniel Saul, Rann Bar-On
2018
all top 5

Cited by 45 Authors

3 Perea, Jose A.
2 He, Yang-Hui Evariste
2 Hirst, Edward
2 Tymochko, Sarah
1 Antia, Alice
1 Arias-Tamargo, Guillermo
1 Bao, Jiakang
1 Bassett, Danielle S.
1 Beshkov, Kosio
1 Blevins, Ann Sizemore
1 Caorsi, Matteo
1 Christianson, Nicolas H.
1 Chung, Yu-Min
1 Dassatti, Alberto
1 Dawes, Jonathan H. P.
1 Edelberg, Jason A.
1 Emerson, Tegan H.
1 Gakhar, Hitesh
1 Hart, Allen G.
1 Heo, Giseon
1 Hess, Kathryn P.
1 Heyes, Elli
1 Hook, James L.
1 Lawson, Austin
1 Lotz, Martin
1 Lupo, Umberto
1 Medina-Mardones, Anibal M.
1 Mitsos, Alexander
1 Netze, Linus
1 Olson, Colin C.
1 Pérez, Julian Burella
1 Rodríguez-Gómez, Diego
1 Schonsheck, Nikolas C.
1 Schonsheck, Stefan C.
1 Schweidtmann, Artur M.
1 Scoccola, Luis Nerio
1 Singhal, Kritika
1 Stantchev, George
1 Tauzin, Guillaume
1 Tiesinga, Paul H. E.
1 Tralie, Christopher J.
1 Tunstall, Lewis C.
1 Weber, Jana M.
1 Wende, Christian
1 Xu, Boyan
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Cited in 10 Serials

3 Journal of Applied and Computational Topology
2 Proceedings of the Royal Society of London. A. Mathematical, Physical and Engineering Sciences
1 Biological Cybernetics
1 Physics Letters. B
1 Journal of Symbolic Computation
1 Neural Networks
1 Advances in Computational Mathematics
1 Optimization and Engineering
1 Journal of Machine Learning Research (JMLR)
1 Forum of Mathematics, Sigma
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Cited in 13 Fields

9 Computer science (68-XX)
8 Algebraic topology (55-XX)
5 Statistics (62-XX)
3 Dynamical systems and ergodic theory (37-XX)
2 Quantum theory (81-XX)
1 Combinatorics (05-XX)
1 Algebraic geometry (14-XX)
1 Several complex variables and analytic spaces (32-XX)
1 Probability theory and stochastic processes (60-XX)
1 Operations research, mathematical programming (90-XX)
1 Game theory, economics, finance, and other social and behavioral sciences (91-XX)
1 Biology and other natural sciences (92-XX)
1 Information and communication theory, circuits (94-XX)

Citations by Year