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STRUCTURE

swMATH ID: 13672
Software Authors: Pritchard; Stephens; Donnelly
Description: The program structure is a free software package for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs.
Homepage: https://web.stanford.edu/group/pritchardlab/structure.html
Related Software: Eigenstrat; Frappe; R; PLINK; fastSTRUCTURE; ADMIXMAP; BAPS 2; UCI-ml; HapMix; mclust; ANCESTRYMAP; PRMLT; MixMoGenD; BayesDA; SciPy; CLUMPP; GenAlEx; LAMP; SABER; BayesianMixtures.jl
Cited in: 88 Documents
Further Publications: http://pritchardlab.stanford.edu/publications.html

Standard Articles

1 Publication describing the Software Year
Softwares and methods for estimating genetic ancestry in human populations Link
Yushi Liu, Toru Nyunoya, Shuguang Leng, Steven A Belinsky, Yohannes Tesfaigzi, Shannon Bruse
2013
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Cited by 255 Authors

4 François, Olivier
4 Rosenberg, Noah A.
3 Corander, Jukka
2 Blei, David M.
2 Boca, Simina M.
2 Browne, Ryan P.
2 De Iorio, Maria
2 Erosheva, Elena A.
2 Fewster, Rachel M.
2 Gyllenberg, Mats
2 Hou-Liu, Jason
2 Koski, Timo J. T.
2 Mukherjee, Sayan
2 Nguyen, XuanLong
2 Roeder, Kathryn
2 Sillanpää, Mikko J.
2 Tal, Omri
2 Toussile, Wilson
1 Abrahamsson, Sara
1 Adhikari, Kaustubh
1 Allison, David B.
1 Ancelet, Sophie
1 Argiento, Raffaele
1 Arjas, Elja
1 Ascolani, Filippo
1 Astle, William J.
1 Asturias, Jose
1 Baduel, Pierre
1 Balding, David Joseph
1 Banerjee, Debapratim
1 Baro, Jesús Angel
1 Barton, Nick H.
1 Basu, Analabha
1 Berk Wheelock, Lauren
1 Betancourt, Brenda
1 Bhadra, Anindya
1 Bhattacharya, Sourabh
1 Bingham, Ella
1 Blum, Avrim L.
1 Bondell, Howard D.
1 Bontemps, Dominique
1 Bose, Aritra N.
1 Broderick, Tamara
1 Bryc, Katarzyna
1 Bryc, Włodzimierz
1 Bui, Hung H.
1 Burkhart, Michael C.
1 Buzbas, Erkan Ozge
1 Calleja-Rodriguez, Ainhoa
1 Cañón, Javier
1 Carleos, Carlos
1 Casarin, Roberto
1 Casella, George
1 Catalano, Marta
1 Caye, Kevin
1 Cercueil, Alain
1 Chang, Jonathan
1 Chen, Yen-Chi
1 Cheng, Li
1 Chikhi, Lounès
1 Chowdhury, Agniva
1 Coja-Oghlan, Amin
1 Cook, Dianne
1 Coop, Graham
1 Craiu, Radu V.
1 Crossa, Jose
1 Dam, Nhan
1 Datta, Jyotishka
1 Davis, John M.
1 Derbanosov, R. Yu.
1 Devlin, Bernie
1 Dickinson, Abigail
1 DiStefano, Charlotte C.
1 Divers, Jasmin
1 Doucet, Arnaud
1 Drineas, Petros
1 Dunson, David Brian
1 Ebrahimi, Mansour
1 Elliott, Lloyd T.
1 Engelhardt, Barbara E.
1 Eskridge, Kent M.
1 Estavoyer, Maxime
1 Etheridge, Alison Mary
1 Fasano, Augusto
1 Favaro, Stefano
1 Fearnhead, Paul
1 Fernandes, David E.
1 Fienberg, Stephen Elliot
1 Franck, Pierre
1 Franzolini, Beatrice
1 Frieze, Alan Michael
1 Fu, Wenjie
1 Gail, Mitchell H.
1 García-Gil, Maria Rosario
1 Gasbarra, Dario
1 Gassiat, Elisabeth
1 Gastwirth, Joseph Lewis
1 Ghosh, Malay
1 Ghosh, Saurabh
1 Giordano, Ryan
...and 155 more Authors
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Cited in 35 Serials

13 Theoretical Population Biology
10 The Annals of Applied Statistics
5 Biometrics
5 Computational Statistics and Data Analysis
4 Statistics and Computing
4 Bayesian Analysis
3 Journal of Mathematical Biology
3 The Annals of Statistics
3 Journal of Computational and Graphical Statistics
3 Journal of Theoretical Biology
2 Mathematical Biosciences
2 Bulletin of Mathematical Biology
2 Journal of the American Statistical Association
2 Journal of Classification
2 Statistical Science
2 Bernoulli
2 Advances in Data Analysis and Classification. ADAC
2 Electronic Journal of Statistics
1 International Economic Review
1 International Statistical Review
1 Probability Theory and Related Fields
1 Japan Journal of Industrial and Applied Mathematics
1 Computational Mathematics and Mathematical Physics
1 European Journal of Operational Research
1 Electronic Journal of Probability
1 Journal of Applied Statistics
1 Statistical Modelling
1 Entropy
1 Journal of Machine Learning Research (JMLR)
1 Computational Intelligence
1 Journal of Statistical Mechanics: Theory and Experiment
1 Optimization Letters
1 AStA. Advances in Statistical Analysis
1 Journal of Agricultural, Biological, and Environmental Statistics
1 Journal de la Société Française de Statistique & Revue de Statistique Appliquée
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Cited in 12 Fields

65 Statistics (62-XX)
36 Biology and other natural sciences (92-XX)
15 Numerical analysis (65-XX)
7 Computer science (68-XX)
6 Probability theory and stochastic processes (60-XX)
5 Game theory, economics, finance, and other social and behavioral sciences (91-XX)
4 Combinatorics (05-XX)
4 Operations research, mathematical programming (90-XX)
1 Linear and multilinear algebra; matrix theory (15-XX)
1 Partial differential equations (35-XX)
1 Calculus of variations and optimal control; optimization (49-XX)
1 Convex and discrete geometry (52-XX)

Citations by Year