bioperl
swMATH ID: | 10579 |
Software Authors: | Stajich, J. E. |
Description: | The bioperl toolkit: Perl modules for the life sciences. BioPerl is a toolkit of perl modules useful in building bioinformatics solutions in Perl. It is built in an object-oriented manner so that many modules depend on each other to achieve a task. The collection of modules in the bioperl-live repository consist of the core of the functionality of bioperl. Additionally auxiliary modules for creating graphical interfaces (bioperl-gui), persistent storage in RDMBS (bioperl-db), running and parsing the results from hundreds of bioinformatics applications (Run package), software to automate bioinformatic analyses (bioperl-pipeline) are all available as Git modules in our repository. |
Homepage: | http://www.bioperl.org/wiki/BioPerl |
Related Software: | R; PERL; Biopython; ClustalW; BLAST; EMBOSS; UniProt; BioJava; PSI-BLAST; Bioconductor; PHYLIP; DIALIGN; Cd-hit; T-coffee; MUSCLE; Soap; MAFFT; CAP3; PhyloNetwork; BioRuby |
Cited in: | 10 Documents |
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Cited by 22 Authors
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Cited in 7 Serials
Cited in 5 Fields
10 | Biology and other natural sciences (92-XX) |
3 | Combinatorics (05-XX) |
2 | Computer science (68-XX) |
1 | General and overarching topics; collections (00-XX) |
1 | Statistics (62-XX) |