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A log-rank-type test to compare net survival distributions. (English) Zbl 1390.62262

Summary: In population-based cancer studies, it is often interesting to compare cancer survival between different populations. However, in such studies, the exact causes of death are often unavailable or unreliable. Net survival methods were developed to overcome this difficulty. Net survival is the survival that would be observed if the disease under study was the only possible cause of death. The Pohar-Perme estimator (PPE) is a nonparametric consistent estimator of net survival. In this article, we present a log-rank-type test for comparing net survival functions (as estimated by PPE) between several groups. We put the test within the counting process framework to introduce the inverse probability weighting procedure as required by the PPE. We built a stratified version to control for categorical covariates that affect the outcome. We performed simulation studies to evaluate the performance of this test and worked an application on real data.

MSC:

62P10 Applications of statistics to biology and medical sciences; meta analysis
62N05 Reliability and life testing
62G05 Nonparametric estimation

Software:

survival; invGauss; R

References:

[1] Aalen, O. O., Borgan, O., and Gjessing, H. K. (2008). Survival and event history analysis. New York: Springer‐Verlag. · Zbl 1204.62165
[2] Allemani, C., Weir, H. K., Carreira, H., Harewood, R., Spika, D., Wang, X.‐S., et al. (2015). Global surveillance of cancer survival 1995-2009: Analysis of individual data for 25 676 887 patients from 279 population‐based registries in 67 countries (CONCORD‐2). The Lancet385, 977-1010.
[3] Andersen, P. K., Borgan, O., Gill, R. D., and Keiding, N. (1993). Statistical Models Based on Counting Processes. New York: Springer‐Verlag. · Zbl 0769.62061
[4] Belot, A., Abrahamowicz, M., Remontet, L., and Giorgi, R. (2010). Flexible modeling of competing risks in survival analysis. Statistics in Medicine29, 2453-2468.
[5] Berkson, J. and Gage, R. P. (1950). Calculation of survival rates for cancer. In Proceedings of the Staff Meetings. Mayo Clinic, volume 25, 270-286.
[6] Bossard, N., Velten, M., Remontet, L., Belot, A., Maarouf, N., Bouvier, A. M., et al. (2007). Survival of cancer patients in France: A population‐based study from The Association of the French Cancer Registries (FRANCIM). European Journal of Cancer43, 149-160.
[7] Breslow, N. E., Edler, L., and Berger, J. (1984). A two‐sample censored‐data rank test for acceleration. Biometrics40, 1049-1062. · Zbl 0562.62042
[8] Danieli, C., Remontet, L., Bossard, N., Roche, L., and Belot, A. (2012). Estimating net survival: The importance of allowing for informative censoring. Statistics in Medicine31, 775-786.
[9] De Angelis, R., Sant, M., Coleman, M. P., Francisci, S., Baili, P., Pierannunzio, D., et al. (2014). Cancer survival in Europe 1999-2007 by country and age: Results of EUROCARE‐5a population‐based study. The Lancet Oncology15, 23-34.
[10] Ederer, F., Axtell, L. M., and Cutler, S. J. (1961). The relative survival rate: A statistical methodology. National Cancer Institute Monograph6, 101-121.
[11] Ederer, F. and Heise, H. (1959). The effect of eliminating deaths from cancer on general population survival rates, methodological note 11, End Results Evaluation Section, National Cancer Institute.
[12] Estève, J., Benhamou, E., Croasdale, M., and Raymond, L. (1990). Relative survival and the estimation of net survival: Elements for further discussion. Statistics in Medicine9, 529-538.
[13] Fleming, T. R. and Harrington, D. P. (2011). Counting Processes and Survival Analysis. New York: Wiley.
[14] Fleming, T. R., Harrington, D. P., and O’Sullivan, M. (1987). Supremum versions of the log‐rank and generalized Wilcoxon statistics. Journal of the American Statistical Association82, 312-320. · Zbl 0612.62063
[15] Fleming, T. R., O’Fallon, J. R., O’Brien, P. C., and Harrington, D. P. (1980). Modified Kolmogorov‐Smirnov test procedures with application to arbitrarily right‐censored data. Biometrics36, 607-625. · Zbl 0453.62037
[16] Giorgi, R., Abrahamowicz, M., Quantin, C., Bolard, P., Estève, J., Gouvernet, J., et al. (2003). A relative survival regression model using B‐spline functions to model non‐proportional hazards. Statistics in Medicine22, 2767-2784.
[17] Hakulinen, T. (1982). Cancer survival corrected for heterogeneity in patient withdrawal. Biometrics38, 933-942.
[18] Howlader, N., Noone, A., Krapcho, M., Neyman, N., Aminou, R., Waldron, W., et al. (2011). SEER cancer statistics review, 1975-2008. Bethesda, MD: National Cancer Institute.
[19] Mantel, N. (1966). Evaluation of survival data and two new rank order statistics arising in its consideration. Cancer Chemotherapy Reports. Part 150, 163-170.
[20] Mantel, N. and Stablein, D. M. (1988). The crossing hazard function problem. The Statistician37, 59-64.
[21] Perme, M. P., Stare, J., and Estève, J. (2012). On estimation in relative survival. Biometrics68, 113-120. · Zbl 1241.62163
[22] Peto, R. and Peto, J. (1972). Asymptotically efficient rank invariant test procedures. Journal of the Royal Statistical Society, Series A (General)135, 185-207.
[23] Qiu, P. and Sheng, J. (2008). A two‐stage procedure for comparing hazard rate functions. Journal of the Royal Statistical Society, Series B (Statistical Methodology)70, 191-208. · Zbl 1400.62220
[24] R Core Team (2014). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
[25] Remontet, L., Bossard, N., Belot, A., and Estève, J. (2007). An overall strategy based on regression models to estimate relative survival and model the effects of prognostic factors in cancer survival studies. Statistics in Medicine26, 2214-2228.
[26] Robins, J. M. (1993). Information recovery and bias adjustment in proportional hazards regression analysis of randomized trials using surrogate markers. In Proceedings of the Biopharmaceutical Section, American Statistical Association, pages 24-33. Alexandria, Virgnia, U.S.
[27] Schoenfeld, D. (1981). The asymptotic properties of nonparametric tests for comparing survival distributions. Biometrika68, 316-319.
[28] SEER Program: Comparative staging guide for cancer (1993). NIH Publication No. 93‐3640.
[29] Surveillance, Epidemiology, and End Results (SEER) Program (Based on the submission November 2006). SEER*Stat Database: Incidence ’ SEER 17 Regs Research Data, Nov 2006 Sub (1973‐2004 varying) ’ Linked To County Attributes ’ Total U.S., 1969‐2004 Counties, National Cancer Institute, DCCPS, Surveillance Research Program, Cancer Statistics Branch, released April 2007.
[30] Therneau, T. M. (2015). A Package for Survival Analysis in S. version 2.38.
[31] Wynant, W. and Abrahamowicz, M. (2014). Impact of the model‐building strategy on inference about nonlinear and time‐dependent covariate effects in survival analysis. Statistics in Medicine33, 3318-3337.
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