Tissue alarmins and adaptive cytokine induce dynamic and distinct transcriptional responses in tissue-resident intraepithelial cytotoxic T lymphocytes (Q89600501)

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scientific article published on 04 February 2020

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English	Tissue alarmins and adaptive cytokine induce dynamic and distinct transcriptional responses in tissue-resident intraepithelial cytotoxic T lymphocytes	scientific article published on 04 February 2020

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6 April 2020

Tissue alarmins and adaptive cytokine induce dynamic and distinct transcriptional responses in tissue-resident intraepithelial cytotoxic T lymphocytes (English)

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6 April 2020

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Cisca Wijmenga

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6 April 2020

Rinse K Weersma

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Rinse K Weersma

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6 April 2020

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Maria Magdalena Zorro

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6 April 2020

Raul Aguirre-Gamboa

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6 April 2020

Toufic Mayassi

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6 April 2020

Cezary Ciszewski

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6 April 2020

Donatella Barisani

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6 April 2020

Shixian Hu

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6 April 2020

Sebo Withoff

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6 April 2020

Yang Li

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6 April 2020

Bana Jabri

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6 April 2020

Iris H Jonkers

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6 April 2020

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4 February 2020

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6 April 2020

Journal of Autoimmunity

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6 April 2020

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6 April 2020

102422

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6 April 2020

Selective expansion of intraepithelial lymphocytes expressing the HLA-E–specific natural killer receptor CD94 in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interleukin 15 mediates epithelial changes in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NKG2D receptors induced by IL-15 costimulate CD28-negative effector CTL in the tissue microenvironment

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Celiac disease association with CD8+ T cell responses: identification of a novel gliadin-derived HLA-A2-restricted epitope.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IL-15 Promotes the Survival of Naive and Memory Phenotype CD8+ T Cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interleukin 15: a key to disrupted intraepithelial lymphocyte homeostasis and lymphomagenesis in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NKG2 receptor-mediated regulation of effector CTL functions in the human tissue microenvironment.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reprogramming of CTLs into natural killer-like cells in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Signals required for programming effector and memory development by CD8+ T cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for the role of interferon-alfa production by dendritic cells in the Th1 response in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model-based analysis of ChIP-Seq (MACS)

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Endoplasmic reticulum stress regulator XBP-1 contributes to effector CD8+ T cell differentiation during acute infection.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CD8+ T cells in type 1 diabetes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Sequence Alignment/Map format and SAMtools

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tissue-mediated control of immunopathology in coeliac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Type I interferons: crucial participants in disease amplification in autoimmunity

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combination of IL-21 and IL-15 enhances tumour-specific cytotoxicity and cytokine production of TCR-transduced primary T cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epigenomics of T cell activation, differentiation, and memory

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HLA-DQ2-restricted gluten-reactive T cells produce IL-21 but not IL-17 or IL-22.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeting interleukin-21 in rheumatoid arthritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

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Intraepithelial Lymphocytes: To Serve and Protect

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential expression analysis for sequence count data

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integrative genomics viewer

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reactome pathway analysis to enrich biological discovery in proteomics data sets

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Potential celiac patients: a model of celiac disease pathogenesis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

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Cytokines in autoimmunity: role in induction, regulation, and treatment

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

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Variation in the ICAM1-ICAM4-ICAM5 locus is associated with systemic lupus erythematosus susceptibility in multiple ancestries

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dense fine-mapping study identifies new susceptibility loci for primary biliary cirrhosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of 15 new psoriasis susceptibility loci highlights the role of innate immunity.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-density genetic mapping identifies new susceptibility loci for rheumatoid arthritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping of immune-mediated disease genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient multivariate linear mixed model algorithms for genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

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TNF and MAP kinase signalling pathways

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Generation of primary human intestinal T cell transcriptomes reveals differential expression at genetic risk loci for immune-mediated disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HTSeq--a Python framework to work with high-throughput sequencing data

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-density mapping of the MHC identifies a shared role for HLA-DRB1*01:03 in inflammatory bowel diseases and heterozygous advantage in ulcerative colitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HISAT: a fast spliced aligner with low memory requirements

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinct and Synergistic Contributions of Epithelial Stress and Adaptive Immunity to Functions of Intraepithelial Killer Cells and Active Celiac Disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IL-15 functions as a danger signal to regulate tissue-resident T cells and tissue destruction

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of CD8(+) T Cells in Multiple Sclerosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In the Intestinal Mucosa of Children With Potential Celiac Disease IL-21 and IL-17A are Less Expressed than in the Active Disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hallmarks of Tissue-Resident Lymphocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene regulation in the immediate-early response process

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The unfolded protein response in immunity and inflammation

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Autoreactive T cells in type 1 diabetes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intraepithelial lymphocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeting interferons as a strategy for systemic sclerosis treatment

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

T cells are influenced by a long non-coding RNA in the autoimmune associated PTPN2 locus

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human intraepithelial lymphocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of novel long noncoding RNAs defines virus-specific effector and memory CD8 T cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improving the diagnostic yield of exome- sequencing by predicting gene-phenotype associations using large-scale gene expression analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Safety and efficacy of AMG 714 in adults with coeliac disease exposed to gluten challenge: a phase 2a, randomised, double-blind, placebo-controlled study

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Safety and efficacy of AMG 714 in patients with type 2 refractory coeliac disease: a phase 2a, randomised, double-blind, placebo-controlled, parallel-group study

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a γc Receptor Antagonist That Prevents Reprogramming of Human Tissue-resident Cytotoxic T Cells by IL15 and IL21

1 reference

https://pubmed.ncbi.nlm.nih.gov/32033836

12 December 2020

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The role of long noncoding RNAs in human T CD3+ cells

1 reference

5 October 2024

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6 April 2020

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6 April 2020

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6 April 2020

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