Biochemical profiling of histone binding selectivity of the yeast bromodomain family (Q21142665)

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scientific article

Biochemical Profiling of Histone Binding Selectivity of the Yeast Bromodomain Family

Language	Label	Description	Also known as
English	Biochemical profiling of histone binding selectivity of the yeast bromodomain family	scientific article	Biochemical Profiling of Histone Binding Selectivity of the Yeast Bromodomain Family

Statements

scholarly article

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Biochemical profiling of histone binding selectivity of the yeast bromodomain family (English)

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1 reference

GOA release 2020-03-11

Histone acetyltransferase GCN5 YGR252W

1 reference

GOA release 2020-03-11

RSC chromatin remodeling complex ATPase subunit STH1 YIL126W

1 reference

GOA release 2020-03-11

Chromatin-binding protein BDF1 YLR399C

1 reference

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

SWI/SNF catalytic subunit SNF2 YOR290C

1 reference

GOA release 2020-03-11

author name string

Qiang Zhang

1

author given names

Qiang

author last names

Zhang

1 reference

PubMed publication ID

17 August 2022

Suvobrata Chakravarty

2

author given names

Suvobrata

author last names

Chakravarty

1 reference

PubMed publication ID

17 August 2022

Dario Ghersi

3

author given names

Dario

author last names

Ghersi

1 reference

PubMed publication ID

17 August 2022

Lei Zeng

4

author given names

Lei

author last names

Zeng

1 reference

PubMed publication ID

17 August 2022

Alexander N Plotnikov

5

author given names

Alexander N

author last names

Plotnikov

1 reference

PubMed publication ID

17 August 2022

Roberto Sanchez

6

author given names

Roberto

author last names

Sanchez

1 reference

PubMed publication ID

17 August 2022

Ming-Ming Zhou

7

author given names

Ming-Ming

author last names

Zhou

1 reference

PubMed publication ID

17 August 2022

language of work or name

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publication date

2010

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5

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1

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e8903

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copyright license

Creative Commons Attribution 4.0 International

26 January 2010

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April 2022 Public Data File from Crossref

copyright status

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The role of human bromodomains in chromatin biology and gene transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Structure and ligand of a histone acetyltransferase bromodomain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Translating the Histone Code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Cooperative binding of two acetylation marks on a histone tail by a single bromodomain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Structural Basis of Site-Specific Histone Recognition by the Bromodomains of Human Coactivators PCAF and CBP/p300

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Autoregulation of the Rsc4 Tandem Bromodomain by Gcn5 Acetylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Structural mechanism of the bromodomain of the coactivator CBP in p53 transcriptional activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Structural basis of lysine-acetylated HIV-1 Tat recognition by PCAF bromodomain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Bdf1, a yeast chromosomal protein required for sporulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Signaling network model of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

19 March 2017

SMART 4.0: towards genomic data integration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

7 April 2017

Multivalent engagement of chromatin modifications by linked binding modules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

7 April 2017

Pfam: a comprehensive database of protein domain families based on seed alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

7 April 2017

Reading protein modifications with interaction domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

7 April 2017

PHD fingers in human diseases: disorders arising from misinterpreting epigenetic marks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

E mu-BRD2 transgenic mice develop B-cell lymphoma and leukemia.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

Matrix2png: a utility for visualizing matrix data

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12 September 2017

PTB or not PTB -- that is the question

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

p300 forms a stable, template-committed complex with chromatin: role for the bromodomain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

The mammalian SWI/SNF complex and the control of cell growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

A computational procedure for determining energetically favorable binding sites on biologically important macromolecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

12 September 2017

Special HATs for special occasions: linking histone acetylation to chromatin assembly and gene activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

27 September 2017

Selective recognition of acetylated histones by bromodomains in transcriptional co-activators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

30 May 2018

ras transformation is associated with decreased expression of the brm/SNF2alpha ATPase from the mammalian SWI-SNF complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

30 May 2018

Deciphering the transcriptional histone acetylation code for a human gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

29 November 2018

Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811197

29 November 2018

Chromatin modification: how to put a HAT on the histones

1 reference

https://pubmed.ncbi.nlm.nih.gov/20126658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Gcn5 bromodomain co-ordinates nucleosome remodelling

1 reference

https://pubmed.ncbi.nlm.nih.gov/20126658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0008903

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2010PLoSO...5.8903Z

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PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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