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Silicon photonics has attracted significant interest in recent years due to its potential in integrated photonics components (1,2) as well as all-dielectric meta-optics elements.(3) Strong photon-photon interactions, aka optical nonlinearity, realizes active control of aforementioned photonic devices.(4,5) However, intrinsic nonlinearity of Si is too weak to envision practical applications. To boost the nonlinear response, long interaction-length structures such as waveguides, or resonant structures such as microring resonators or photonic crystals have been adopted.(6,7) Nevertheless, their feature sizes are typically larger than 10 $\mu$m, much larger than their electronic counterparts. Here we discover, when reducing the size of Si resonator down to ~100 nm, a giant photothermal nonlinearity that yields 400% reversible and repeatable deviation from linear scattering response at low excitation intensity (mW/$\mu$m$^2$). The equivalent nonlinear index n$_2$ at nanoscale is five-order larger than that of bulk, due to Mie resonance enhanced absorption and high-efficiency heating in the thermally isolated nanostructure. In addition, the nanoscale thermal relaxation time reaches nanosecond, implying GHz modulation speed. This large and fast nonlinearity enables applications toward all-optical control in nanoscale, as well as super-resolution imaging of silicon.