… The database described here aims to bring together all cases of domain motions in the
structural database as determined by the domain motion analysis program DynDom (Hayward …

… : The current DynDom database of protein domain motions is a user-created database that
… and a non-redundant description of domain movements from structures stored in the current …

… in the DynDom database of protein domain motions. Figure 2 shows the database schema.
The three tables at the top of the figure, "protein_family", "dyndom_run", and "domain" existed …

… Its inputs are two structure files that indicate a possible domain movement, but the onus has
… of domain motions in proteins from conformational change: DynDom version 1.50. J. Mol. …

… In this work, DynDom has been used to analyze 24 proteins … the domain motion of each
of the 24 proteins individually, but … that may govern domain motions in proteins. For those …

… DataBase of Protein Domain Movements (NRDPDM) showed that protein domain movements
… There is also a link to the corresponding DynDom page for that domain movement which …

… These protein domain movements are the subject of this study. Structures of proteins are
determined … identified by DynDom and the changes in contacts between residues from different …

… Databases of protein domain motions have been also available in recent years, for example
the DynDom database [16,… a database that covers all kinds of protein motions ranging from …

… To improve statistics, we used the DynDom program directly on structures provided at the
DBMM, which gave an extra two examples to add to the 21 from NRDPDM2d in the shear …

… protein at residue and atom levels. The dynamic domains defined by DynDom and their
mutual motions are also helpful to understand the dynamics of the proteins. With the collection of …