(Q35035073)

5 August 2017

title

CCCTC-binding factor (CTCF) and cohesin influence the genomic architecture of the Igh locus and antisense transcription in pro-B cells (English)

1 reference

5 August 2017

Nicholas J Schork

1 reference

5 August 2017

Cornelis Murre

1 reference

5 August 2017

Stephanie C Degner

1 reference

5 August 2017

Jiyoti Verma-Gaur

1 reference

5 August 2017

Timothy P Wong

1 reference

5 August 2017

Claudia Bossen

1 reference

5 August 2017

G Michael Iverson

1 reference

5 August 2017

Ali Torkamani

1 reference

5 August 2017

Christian Vettermann

1 reference

5 August 2017

Yin C Lin

1 reference

5 August 2017

Zhongliang Ju

1 reference

5 August 2017

Danae Schulz

1 reference

5 August 2017

Caroline S Murre

1 reference

5 August 2017

Barbara K Birshtein

1 reference

5 August 2017

Mark S Schlissel

1 reference

5 August 2017

Roy Riblet

1 reference

5 August 2017

Ann J Feeney

1 reference

5 August 2017

language of work or name

English

0 references

publication date

23 May 2011

1 reference

Proceedings of the National Academy of Sciences of the United States of America

5 August 2017

1 reference

inferred from page(s)

published in

1 reference

5 August 2017

volume

108

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5 August 2017

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5 August 2017

page(s)

9566-9571

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The distal V(H) gene cluster of the Igh locus contains distinct regulatory elements with Pax5 transcription factor-dependent activity in pro-B cells

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Transcription and recombination factories: common features?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Elements between the IgH variable (V) and diversity (D) clusters influence antisense transcription and lineage-specific V(D)J recombination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

The mouse immunoglobulin heavy chain V-D intergenic sequence contains insulators that may regulate ordered V(D)J recombination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Cohesin: its roles and mechanisms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

CCCTC-binding factor and the transcription factor T-bet orchestrate T helper 1 cell-specific structure and function at the interferon-gamma locus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

CTCF: master weaver of the genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Regulation of B cell fate commitment and immunoglobulin heavy-chain gene rearrangements by Ikaros.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

CTCF physically links cohesin to chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

The 3D structure of the immunoglobulin heavy-chain locus: implications for long-range genomic interactions.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Cohesins functionally associate with CTCF on mammalian chromosome arms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Cohesin mediates transcriptional insulation by CCCTC-binding factor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Chromosomal position of a VH gene segment determines its activation and inactivation as a substrate for V(D)J recombination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

S-S synapsis during class switch recombination is promoted by distantly located transcriptional elements and activation-induced deaminase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Evidence for physical interaction between the immunoglobulin heavy chain variable region and the 3' regulatory region

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

We gather together: insulators and genome organization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Quantitative analysis of chromosome conformation capture assays (3C-qPCR).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Antisense intergenic transcription precedes Igh D-to-J recombination and is controlled by the intronic enhancer Emu.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Yin Yang 1 is a critical regulator of B-cell development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Elucidation of IgH intronic enhancer functions via germ-line deletion

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Visualization of looping involving the immunoglobulin heavy-chain locus in developing B cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Chromatin architecture near a potential 3' end of the igh locus involves modular regulation of histone modifications during B-Cell development and in vivo occupancy at CTCF sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Locus 'decontraction' and centromeric recruitment contribute to allelic exclusion of the immunoglobulin heavy-chain gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Long-term cultured E2A-deficient hematopoietic progenitor cells are pluripotent

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Pax5 induces V-to-DJ rearrangements and locus contraction of the immunoglobulin heavy-chain gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111298

Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement.

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1019391108

Cutting edge: developmental stage-specific recruitment of cohesin to CTCF sites throughout immunoglobulin loci during B lymphocyte development

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1019391108

Identification of a Ctcf cofactor, Yy1, for the X chromosome binary switch.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1019391108

Localization of the 3' IgH locus elements that effect long-distance regulation of class switch recombination

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21606361

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The immunoglobulin heavy-chain locus hs3b and hs4 3' enhancers are dispensable for VDJ assembly and somatic hypermutation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21606361

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Repeat organization and epigenetic regulation of the DH-Cmu domain of the immunoglobulin heavy-chain gene locus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21606361

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1019391108

1 reference

5 August 2017

0 references

1 reference

5 August 2017

1 reference