(Q28280058)

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P bodies: at the crossroads of post-transcriptional pathways

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P bodies: at the crossroads of post-transcriptional pathways (English)

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Elisa Izaurralde

3

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Isabelle Behm-Ansmant

2

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1

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January 2007

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Nature Reviews Molecular Cell Biology

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8

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1

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9-22

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Bringing the role of mRNA decay in the control of gene expression into focus

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Process or perish: quality control in mRNA biogenesis

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Control of translation and mRNA degradation by miRNAs and siRNAs

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A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates

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31 March 2020

Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures

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Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay

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Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

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31 March 2020

Cytoplasmic foci are sites of mRNA decay in human cells

1 reference

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31 March 2020

A phosphorylated cytoplasmic autoantigen, GW182, associates with a unique population of human mRNAs within novel cytoplasmic speckles

1 reference

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31 March 2020

The GW182 protein colocalizes with mRNA degradation associated proteins hDcp1 and hLSm4 in cytoplasmic GW bodies

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31 March 2020

RNA-associated protein 55 (RAP55) localizes to mRNA processing bodies and stress granules

1 reference

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31 March 2020

Ge-1 is a central component of the mammalian cytoplasmic mRNA processing body

1 reference

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31 March 2020

Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping

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31 March 2020

Processing body autoantibodies reconsidered

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Novel Sm-like proteins with long C-terminal tails and associated methyltransferases

1 reference

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31 March 2020

Novel conserved domains in proteins with predicted roles in eukaryotic cell-cycle regulation, decapping and RNA stability

1 reference

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31 March 2020

GW182 is critical for the stability of GW bodies expressed during the cell cycle and cell proliferation

1 reference

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31 March 2020

Processing bodies require RNA for assembly and contain nontranslating mRNAs

1 reference

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31 March 2020

Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies

1 reference

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31 March 2020

Targeting of aberrant mRNAs to cytoplasmic processing bodies

1 reference

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31 March 2020

A role for eIF4E and eIF4E-transporter in targeting mRNPs to mammalian processing bodies

1 reference

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31 March 2020

A role for the eIF4E-binding protein 4E-T in P-body formation and mRNA decay

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The enzymes and control of eukaryotic mRNA turnover

1 reference

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31 March 2020

RNA-quality control by the exosome

1 reference

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31 March 2020

Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Mutations in the Saccharomyces cerevisiae LSM1 gene that affect mRNA decapping and 3' end protection

1 reference

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31 March 2020

The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p

1 reference

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31 March 2020

A Sm-like protein complex that participates in mRNA degradation

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Yeast Sm-like proteins function in mRNA decapping and decay

1 reference

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31 March 2020

Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs

1 reference

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31 March 2020

General translational repression by activators of mRNA decapping

1 reference

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31 March 2020

Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54

1 reference

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31 March 2020

mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Stress granules and processing bodies are dynamically linked sites of mRNP remodeling

1 reference

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31 March 2020

Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species

1 reference

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31 March 2020

Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells

1 reference

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31 March 2020

Early nonsense: mRNA decay solves a translational problem

1 reference

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31 March 2020

Computational modeling and experimental analysis of nonsense-mediated decay in yeast

1 reference

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An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation

1 reference

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Rapid deadenylation triggered by a nonsense codon precedes decay of the RNA body in a mammalian cytoplasmic nonsense-mediated decay pathway

1 reference

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31 March 2020

Premature termination codons enhance mRNA decapping in human cells.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Nonsense-mediated messenger RNA decay is initiated by endonucleolytic cleavage in Drosophila

1 reference

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31 March 2020

SMG7 acts as a molecular link between mRNA surveillance and mRNA decay

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

SMG-5, required for C.elegans nonsense-mediated mRNA decay, associates with SMG-2 and protein phosphatase 2A.

1 reference

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31 March 2020

Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7

1 reference

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31 March 2020

Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways

1 reference

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Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs

1 reference

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31 March 2020

A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

1 reference

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31 March 2020

MicroRNAs: genomics, biogenesis, mechanism, and function

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RNAi: the nuts and bolts of the RISC machine

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Novel modes of protein-RNA recognition in the RNAi pathway

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31 March 2020

Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

MicroRNAs direct rapid deadenylation of mRNA

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs

1 reference

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31 March 2020

Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

A role for the P-body component GW182 in microRNA function

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Disruption of GW bodies impairs mammalian RNA interference

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Identification of novel argonaute-associated proteins

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The developmental timing regulator AIN-1 interacts with miRISCs and may target the argonaute protein ALG-1 to cytoplasmic P bodies in C. elegans

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Inhibition of translational initiation by Let-7 MicroRNA in human cells

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Relief of microRNA-mediated translational repression in human cells subjected to stress

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Formation of GW bodies is a consequence of microRNA genesis

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The translational regulator CPEB1 provides a link between dcp1 bodies and stress granules

1 reference

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31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Moving messages: the intracellular localization of mRNAs

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Mammalian stress granules represent sites of accumulation of stalled translation initiation complexes

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Requirement for P granules and meiosis for accumulation of the germline RNA helicase CGH-1.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Isolation of a ribonucleoprotein complex involved in mRNA localization in Drosophila oocytes

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

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A complex containing the Sm protein CAR-1 and the RNA helicase CGH-1 is required for embryonic cytokinesis in Caenorhabditis elegans

1 reference

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A conserved RNA-protein complex component involved in physiological germline apoptosis regulation in C. elegans

1 reference

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31 March 2020

staufen, a gene required to localize maternal RNAs in the Drosophila egg

1 reference

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Staufen recruitment into stress granules does not affect early mRNA transport in oligodendrocytes

1 reference

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31 March 2020

Drosophila decapping protein 1, dDcp1, is a component of the oskar mRNP complex and directs its posterior localization in the oocyte.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Caenorhabditis elegans decapping proteins: localization and functional analysis of Dcp1, Dcp2, and DcpS during embryogenesis

1 reference

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The chromatoid body of male germ cells: similarity with processing bodies and presence of Dicer and microRNA pathway components

1 reference

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Neuronal RNA granules: a link between RNA localization and stimulation-dependent translation

1 reference

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31 March 2020

Facilitation of dendritic mRNA transport by CPEB

1 reference

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31 March 2020

Isolation and characterization of Staufen-containing ribonucleoprotein particles from rat brain

1 reference

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Microtubule-dependent recruitment of Staufen-green fluorescent protein into large RNA-containing granules and subsequent dendritic transport in living hippocampal neurons

1 reference

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31 March 2020

Xenopus Staufen is a component of a ribonucleoprotein complex containing Vg1 RNA and kinesin

1 reference

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31 March 2020

AU-rich elements and associated factors: are there unifying principles?

1 reference

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31 March 2020

AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Recruitment and activation of mRNA decay enzymes by two ARE-mediated decay activation domains in the proteins TTP and BRF-1

1 reference

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31 March 2020

ARE-mRNA degradation requires the 5'-3' decay pathway.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Regulated ARE-mediated mRNA decay in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

MK2-induced tristetraprolin:14-3-3 complexes prevent stress granule association and ARE-mRNA decay

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Involvement of microRNA in AU-rich element-mediated mRNA instability

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

A conserved role of a DEAD box helicase in mRNA masking

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The active form of Xp54 RNA helicase in translational repression is an RNA-mediated oligomer

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Determinants of Rbp1p localization in specific cytoplasmic mRNA-processing foci, P-bodies.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Sbp1p affects translational repression and decapping in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Quantitative proteomics identifies Gemin5, a scaffolding protein involved in ribonucleoprotein assembly, as a novel partner for eukaryotic initiation factor 4E

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Dcs2, a novel stress-induced modulator of m7GpppX pyrophosphatase activity that locates to P bodies.

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Trapping of messenger RNA by Fragile X Mental Retardation protein into cytoplasmic granules induces translation repression

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Fragile X mental retardation protein shifts between polyribosomes and stress granules after neuronal injury by arsenite stress or in vivo hippocampal electrode insertion

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Vertebrate GLD2 poly(A) polymerases in the germline and the brain

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Oskar protein interaction with Vasa represents an essential step in polar granule assembly

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Drosophila tudor is essential for polar granule assembly and pole cell specification, but not for posterior patterning

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

A sponge-like structure involved in the association and transport of maternal products during Drosophila oogenesis

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Posterior localization of vasa protein correlates with, but is not sufficient for, pole cell development

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

Live imaging of nuage and polar granules: evidence against a precursor-product relationship and a novel role for Oskar in stabilization of polar granule components

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

BDNF induces translocation of initiation factor 4E to mRNA granules: Evidence for a role of synaptic microfilaments and integrins

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

The insulin-like growth factor mRNA binding-protein IMP-1 and the Ras-regulatory protein G3BP associate with tau mRNA and HuD protein in differentiated P19 neuronal cells

1 reference

https://api.crossref.org/works/10.1038%2FNRM2080

31 March 2020

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