(Q34201243)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21765417%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters (English)

1 reference

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7 February 2020

author

Joaquin Zacarias Cabeza

1 reference

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7 February 2020

1 reference

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7 February 2020

Jean-Christophe Andrau

1 reference

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7 February 2020

Pierre Cauchy

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21765417%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Romain Fenouil

1 reference

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7 February 2020

Marta Gut

1 reference

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7 February 2020

Dirk Eick

1 reference

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7 February 2020

Frederic Koch

1 reference

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7 February 2020

Thomas K Albert

1 reference

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7 February 2020

Albane Lamy de la Chapelle

1 reference

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7 February 2020

Martin Heidemann

1 reference

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7 February 2020

Corinna Hintermair

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21765417%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Ivo Gut

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21765417%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Pierre Ferrier

1 reference

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7 February 2020

publication date

17 July 2011

1 reference

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Nature Structural & Molecular Biology

7 February 2020

published in

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7 February 2020

volume

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7 February 2020

issue

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7 February 2020

page(s)

956-963

1 reference

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The basal initiation machinery: beyond the general transcription factors

7 February 2020

cites work

1 reference

Progression through the RNA polymerase II CTD cycle

31 March 2020

1 reference

Genome-wide analysis of mammalian promoter architecture and evolution

31 March 2020

1 reference

Genome-wide RNA polymerase II: not genes only!

31 March 2020

1 reference

Histone modifications at human enhancers reflect global cell-type-specific gene expression

31 March 2020

1 reference

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

31 March 2020

1 reference

Combinatorial patterns of histone acetylations and methylations in the human genome

31 March 2020

1 reference

High-resolution profiling of histone methylations in the human genome

31 March 2020

1 reference

ChIP-seq accurately predicts tissue-specific activity of enhancers

31 March 2020

1 reference

Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome

31 March 2020

1 reference

Long-range regulation of alpha-globin gene expression

31 March 2020

1 reference

A spectrum of gene regulatory phenomena at mammalian beta-globin gene loci

31 March 2020

1 reference

The role of enhancers as centres for general transcription factor recruitment.

31 March 2020

1 reference

A large fraction of extragenic RNA pol II transcription sites overlap enhancers

31 March 2020

1 reference

Widespread transcription at neuronal activity-regulated enhancers

31 March 2020

1 reference

FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

31 March 2020

1 reference

CD4/CD8-lineage differentiation in the thymus: from nuclear effectors to membrane signals

31 March 2020

1 reference

At the crossroads: diverse roles of early thymocyte transcriptional regulators

31 March 2020

1 reference

Identification and characterization of a T-cell-specific enhancer adjacent to the murine CD4 gene

31 March 2020

1 reference

Identification of a new cis-regulatory element of the terminal deoxynucleotidyl transferase gene in the 5' region of the murine locus

31 March 2020

1 reference

A complex network of regulatory elements in Ikaros and their activity during hemo-lymphopoiesis

31 March 2020

1 reference

A cis element in the recombination activating gene locus regulates gene expression by counteracting a distant silencer

31 March 2020

1 reference

Hierarchical interactions of control elements determine CD8alpha gene expression in subsets of thymocytes and peripheral T cells.

31 March 2020

1 reference

Multiple developmental stage-specific enhancers regulate CD8 expression in developing thymocytes and in thymus-independent T cells.

31 March 2020

1 reference

Lineage-specific DNA methylation in T cells correlates with histone methylation and enhancer activity.

31 March 2020

1 reference

Development and function of T cells in mice rendered interleukin-2 deficient by gene targeting

31 March 2020

1 reference

Frequency distribution of TATA Box and extension sequences on human promoters

31 March 2020

1 reference

The Ets-1 transcription factor is required for complete pre-T cell receptor function and allelic exclusion at the T cell receptor beta locus

31 March 2020

1 reference

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

31 March 2020

1 reference

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

31 March 2020

1 reference

CpG islands recruit a histone H3 lysine 36 demethylase

31 March 2020

1 reference

Promoter activation by enhancer-dependent and -independent loading of activator and coactivator complexes

31 March 2020

1 reference

A defined locus control region determinant links chromatin domain acetylation with long-range gene activation

31 March 2020

1 reference

Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

31 March 2020

1 reference

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

31 March 2020

1 reference

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

31 March 2020

1 reference

Divergent transcription from active promoters

31 March 2020

1 reference

Long noncoding RNAs with enhancer-like function in human cells

31 March 2020

1 reference

Core transcriptional regulatory circuitry in human embryonic stem cells

31 March 2020

1 reference

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets

31 March 2020

1 reference

CoCAS: a ChIP-on-chip analysis suite

31 March 2020

1 reference

BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources

31 March 2020

1 reference

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

31 March 2020

1 reference

RSAT: regulatory sequence analysis tools

31 March 2020

1 reference

A T cell-specific enhancer is located in a DNase I-hypersensitive area at the 3' end of the CD3-delta gene

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21765417

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21765417