Sep 3, 2012 � We use this algorithm to reconstruct contiguous regions of mammalian and plant ancestral genomes in a few minutes for a dozen species and�...

A reconciled gene tree is also a binary tree that describes the evolution of a set of genes, called a gene family, through the evolutionary mechanisms of�...

Oct 17, 2015 � Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach. Cedric Chauve, Yann Ponty, Jo�o Paulo Pereira Zanetti. To�...

Evolution of gene neighborhoods within reconciled phylogenies. Bioinformatics,. 28(18):382–388, 2012. 4. P. Clote, F. Lou, and W. A. Lorenz. Maximum expected�...

Sep 8, 2015 � Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach. Cedric Chauve, Yann Ponty, Jo�o Paulo Peirera Zanetti.

We consider a recently introduced dynamic programming scheme to compute parsimonious evolutionary scenarios for gene adjacencies.

Dec 16, 2015 � Results We apply our algorithms to a dataset of mammalian gene trees and adjacencies, and observe a significant reduction of the number of�...

Sep 8, 2015 � Abstract. Context: The reconstruction of evolutionary scenarios for whole genomes in terms of genome rearrangements is a fundamental problem�...

Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material � Biology, Computer Science.

Sep 8, 2012 � We use this algorithm to reconstruct contiguous regions of mammalian and plant ancestral genomes in a few minutes for a dozen species and�...