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In phylogenetic reconstruction, any single criterion has certain limitations. The maximum likelihood (ML) seems to provide strong statistical analysis but�...
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Phylogenetic reconstruction algorithms model evolutionary history using tree-like structures that describe the estimated ancestry of a given set of species.
Various phylogenetic reconstruction methods have been proposed in the literature. Most of them use one optimality criterion (or objective function) to evaluate�...
We suggest a multi criterion approach for the selection of optimal outgroup species on the basis of (1) low substitution rate, (2) ingroup-like G+C composition,
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Apr 4, 2024 � We propose a multi-neighbor-joining (MNJ) algorithm capable of performing multiple pairing decisions at each level of the tree reconstruction.
Four inference methods based on three optimization criteria are commonly used to reconstruct evolutionary history from molecular data: neighbor joining (NJ),�...
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Various phylogenetic reconstruction methods have been proposed in order to determine the most accurate tree that represents evolutionary relationships among�...
Oct 21, 2023 � It is an agglomerative or bottom-up method that forms a phylogenetic tree grouping pairs of taxa into nodes in a greedy manner. Since its�...
TL;DR: This paper aims to solve the phylogenetic inference problem by applying MPI/OpenMP schemes to two multiobjective metaheuristics: fast non-dominated�...
Pinghao Wang, Bing Bing Zhou, Chen Wang, Pang Bo, Albert Y. Zomaya: A Multi-criteria Phylogenetic Reconstruction Method. BIOCOMP 2008: 104-110.