[HTML][HTML] Emerging role of tumor-related functional peptides encoded by lncRNA and circRNA
P Wu, Y Mo, M Peng, T Tang, Y Zhong, X Deng…�- Molecular cancer, 2020 - Springer
Non-coding RNAs do not encode proteins and regulate various oncological processes. They
are also important potential cancer diagnostic and prognostic biomarkers. Bioinformatics�…
are also important potential cancer diagnostic and prognostic biomarkers. Bioinformatics�…
Recent developments in the MAFFT multiple sequence alignment program
K Katoh, H Toh�- Briefings in bioinformatics, 2008 - academic.oup.com
The accuracy and scalability of multiple sequence alignment (MSA) of DNAs and proteins
have long been and are still important issues in bioinformatics. To rapidly construct a�…
have long been and are still important issues in bioinformatics. To rapidly construct a�…
Accurate prediction of protein structures and interactions using a three-track neural network
DeepMind presented notably accurate predictions at the recent 14th Critical Assessment of
Structure Prediction (CASP14) conference. We explored network architectures that�…
Structure Prediction (CASP14) conference. We explored network architectures that�…
[HTML][HTML] SARS-CoV-2-reactive T cells in healthy donors and patients with COVID-19
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused the rapidly
unfolding coronavirus disease 2019 (COVID-19) pandemic 1, 2. Clinical manifestations of�…
unfolding coronavirus disease 2019 (COVID-19) pandemic 1, 2. Clinical manifestations of�…
[HTML][HTML] Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale
Many industrial chemicals that are produced from fossil resources could be manufactured
more sustainably through fermentation. Here we describe the development of a carbon�…
more sustainably through fermentation. Here we describe the development of a carbon�…
The HDOCK server for integrated protein–protein docking
Abstract The HDOCK server (http://hdock. phys. hust. edu. cn/) is a highly integrated suite of
homology search, template-based modeling, structure prediction, macromolecular docking�…
homology search, template-based modeling, structure prediction, macromolecular docking�…
[HTML][HTML] Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
BJ Walker, T Abeel, T Shea, M Priest, A Abouelliel…�- PloS one, 2014 - journals.plos.org
Advances in modern sequencing technologies allow us to generate sufficient data to
analyze hundreds of bacterial genomes from a single machine in a single day. This potential�…
analyze hundreds of bacterial genomes from a single machine in a single day. This potential�…
Validating the AMRFinder tool and resistance gene database by using antimicrobial resistance genotype-phenotype correlations in a collection of isolates
M Feldgarden, V Brover, DH Haft…�- Antimicrobial agents�…, 2019 - Am Soc Microbiol
Antimicrobial resistance (AMR) is a major public health problem that requires publicly
available tools for rapid analysis. To identify AMR genes in whole-genome sequences, the�…
available tools for rapid analysis. To identify AMR genes in whole-genome sequences, the�…
Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
Gut commensal microbes shape the mucosal immune system by regulating the
differentiation and expansion of several types of T cell,,,,. Clostridia, a dominant class of�…
differentiation and expansion of several types of T cell,,,,. Clostridia, a dominant class of�…
AliView: a fast and lightweight alignment viewer and editor for large datasets
A Larsson�- Bioinformatics, 2014 - academic.oup.com
AliView is an alignment viewer and editor designed to meet the requirements of next-
generation sequencing era phylogenetic datasets. AliView handles alignments of unlimited�…
generation sequencing era phylogenetic datasets. AliView handles alignments of unlimited�…